Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1444 |
Symbol | |
ID | 5373228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1744127 |
End bp | 1744933 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829643 |
Product | methionine aminopeptidase |
Protein accession | YP_001365657 |
Protein GI | 152999976 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000385139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATAG TCATCAAGAC AGCTGAAGAA ATTGAAAAAA TGCGTGCTGC GGGCAAACTT GCCGCACAGG TATTAGAAAT GATCGCTCCG CATGTTAAGC CGGGCGTGAC CACCAATGAA CTCAATGACC TCTGCGCCAA ATATACCGAA GAGCAAGGTG CGATTTCGGC GCCGCTTAAT TATCATGGTT TTCCTAAGTC CATTTGCACT TCTGTAAACC ATGTCATTTG CCACGGTATT CCGAACGACA ACCCACCATT GAAAGAAGGC GATATCCTCA ATATCGACAT CACAGTGATT AAAGACGGCT ATCACGGCGA TACCTCACAG ATGTTTTTGA TTGGTGAAGT GAGCGCGAAG GACAAACGTC TGTGCCGCAT CGCGCAAGAA AGCCTGTATT TGGCTATTCG TAAGGTGCGT CCGGGCCTAA AACTGGGTGA AATTGGCAAT ACTATCGAAA AATTCATCAA AGCAAGCAAA ACAGGCCTTG AGAAATATTC CATCGTGCAA GATTATTGTG GCCACGGTAT TGGCTCAGGT TTCCATGAGG AACCGCAAGT TATGCATTAC CGTAACGGCG ATAACACAGT ATTACGCCCA GGCATGTGTT TCACTATTGA ACCTATGATC AATGCCGGTC GCCACACGAC CATACTCGAT CGCGATGATA AGTGGACGGT TACCACCTCC GATGGTAAAA ATTCTGCCCA GTGGGAACAT ACCCTACTTG TGACTGAAAA AGGGGTTGAA GTACTGACCC TGCGTGAGGA TGAAGATTTC CCTCGCATCA TCAATCACGA GCGATAG
|
Protein sequence | MSIVIKTAEE IEKMRAAGKL AAQVLEMIAP HVKPGVTTNE LNDLCAKYTE EQGAISAPLN YHGFPKSICT SVNHVICHGI PNDNPPLKEG DILNIDITVI KDGYHGDTSQ MFLIGEVSAK DKRLCRIAQE SLYLAIRKVR PGLKLGEIGN TIEKFIKASK TGLEKYSIVQ DYCGHGIGSG FHEEPQVMHY RNGDNTVLRP GMCFTIEPMI NAGRHTTILD RDDKWTVTTS DGKNSAQWEH TLLVTEKGVE VLTLREDEDF PRIINHER
|
| |