| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1436 |
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| Symbol | |
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| ID | 5373066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1734069 |
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| End bp | 1734932 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829635 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001365649 |
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| Protein GI | 152999968 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAG ATGATATCTG GCTTGAAACG CCTGAAAATG CACTGAATGC ATCCCAAGAG
GATGACTCAG AAGAGCAGGC GCCTGAGATT GAAATTCTTT ATGAAGATGA GCACTTAGTG
GCAATTCATA AACCTGCAGG CTTATTGGTC CACCGCAGTT ATTTAGCGCG TCGGGAGCGA
TTTTTTGCCA TGCAGCTGAC CCGCGACTTA GTCGGCTGTC ATGTGTTCCC TGTTCATCGT
CTCGACAGGC CGACATCTGG CGTGCTTTTG TTTGCCAAGA GCAGCGAAGT CGCCAATGCA
CTGTGTGAGC AATTTGCCTC CCATACGATT GAAAAACAAT ATTTGGCTTT AGTGCGCGGC
AATATGCATG AGAGCGGTAT TTTAGACTAT GCGCTTAAGG TTGAGTTGGA TGAATTAGGC
GATAAGAATG CCGATCCCAA CAAAGCCGCG CAGGAAGCTG TGACGGCTTA TGAGCCATTA
CTCAATACTG AAATTCCGTA TCCCTCGGGC CGATATCCCA CTAGCCGATT TGCACTGGTA
CGCTTGAGCC CTAAAACGGG GCGTAAGCAT CAGCTTAGAA GACATATGGC GCATTTACGT
CACCCTATTG TCGGTGATAC CACCCATGGT GACGGTAAGC AAAATGCGTT TTTCCGCGAG
CATTTTGGCA TTAATCGCCT GTGGCTTATC GCGAAAAAGC TCAGCTTCAC CCATCCAGTG
ACTCAAGTTC GGCTCAGTAT AGAAACTGAG CTCGAGCCTC AGTGGGAAAC CGTGTTTGCC
GAGCTAGGTT GGGACGAGGC GACCTTAAGT CAACAGGCTG AGTTGTTAAT CGCCACGGAT
GAAATACCAG CTGGAAATGC GTAA
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| Protein sequence | MNQDDIWLET PENALNASQE DDSEEQAPEI EILYEDEHLV AIHKPAGLLV HRSYLARRER
FFAMQLTRDL VGCHVFPVHR LDRPTSGVLL FAKSSEVANA LCEQFASHTI EKQYLALVRG
NMHESGILDY ALKVELDELG DKNADPNKAA QEAVTAYEPL LNTEIPYPSG RYPTSRFALV
RLSPKTGRKH QLRRHMAHLR HPIVGDTTHG DGKQNAFFRE HFGINRLWLI AKKLSFTHPV
TQVRLSIETE LEPQWETVFA ELGWDEATLS QQAELLIATD EIPAGNA
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