| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1416 |
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| Symbol | |
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| ID | 5373140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1700854 |
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| End bp | 1702500 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829615 |
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| Product | PfaD family protein |
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| Protein accession | YP_001365629 |
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| Protein GI | 152999948 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGCC ATACTCTAGA TCAATTCAAT AGTAATAACG AAAAACTCAG CCCTTGGCCG
TGGCAAGTCA ACGATGCAGA GCTGAGCTTT GATATCGACT CATTAGGCAA AAAACTCAAA
GATTTAAGCC AAGCCTGCTA CTTAGTGAAT CACAGCGAAA AAGGCTTAGG CATAGCGCAA
ACGGCCGAAG TGACCACCAG TGACAGCCAA GCGCCATTGG GCTCACACCC TGTCAGCGCC
TTTGCCCCTG CCCTTGGCAC CCAAAGTTTA GGCGACAGTA ATTTTCGCCG CGTCCACGGC
GTTAAATACG CTTACTACGC CGGCGCTATG GCAAACGGTA TTGCCTCGGA AGAACTGGTT
ATCGCCCTTG GCCAAGCGGG CATTTTGTGC TCATTTGGCG CGGCGGGGTT AATTCCATCC
CGTGTTGAAG CGGCCATTAC CCGCATTCAA GCAGCGCTGC CCAATGGCCC TTACGCTTTT
AACTTAATTC ACAGCCCAAG CGAGCCCGCA TTAGAGCGCG GCAGCGTTGA GCTGTTTTTA
AAACATAAAG TGCGCACGGT CGAAGCCTCG GCATTTTTAG GTTTAACACC GCAAATCGTC
TATTACCGCG CCGCAGGTTT GAGCCGCGAC GAACATGGCG AAATCGTCAT TGGCAACAAA
GTCATCGCAA AAATCAGCCG CACCGAAGTC GCGACTAAGT TTATGGAGCC AGCGCCAGCC
AAAATCCTCC AGCAACTAGT GAGTGACGGC CTTATCAGCC AAGACCAAAT GGCGATGGCG
CAACTCGTGC CAATGGCGGA CGACATCACA GCCGAAGCCG ACTCAGGCGG CCATACCGAC
AATCGCCCAT TGGTCACGCT ATTACCGACG ATTTTGGCGC TCAAAGATGA AATCCAAGCT
AAGTATCAAT ATAAAACGCC CATCCGTGTG GGTGCTGGCG GCGGTGTCGG CACTCCCGAT
GCAGCATTAG CCACCTTCAA CATGGGCGCG GCGTTTATCG TCACAGGTTC AATCAACCAA
GCCTGCGTCG AAGCGGGCGC CAGCGAACAC ACCCGTAAGT TACTCGCCAC CACAGAAATG
GCCGATGTGA CTATGGCGCC TGCCGCCGAT ATGTTCGAAA TGGGCGTGAA ATTACAAGTG
GTTAAGCGCG GCACTCTGTT CCCGATGCGC GCCAATAAGC TTTATGAAAT CTACACCCGT
TACGACTCGA TTGATGCCAT CCCTGCGGAC GAGCGTAAAA AGCTCGAAGA GCAAGTGTTC
CGCTCATCAC TCGATGACAT TTGGGCTGGC ACAGTCGCCC ACTTTAACGA GCGCGATCCC
AAGCAAATCG AGCGCGCGCT GGATAACCCA AAACGTAAGA TGGCACTGAT TTTCCGCTGG
TATTTGGGTC TGTCGAGCCG CTGGTCAAAC ACAGGTGAAG TCGGCCGCGA AATGGATTAC
CAAATCTGGG CAGGCCCAGC ACTGGGTGCA TTTAATGCTT GGGCCAAAGG CAGTTATTTA
GATGACTATA AAGCCCGTAA TGCCGTGGAT TTAGCCAAAC ATTTAATGGT AGGCGCGGCG
TATCAATCCC GCATTAACTT GCTGTTATCC CAAGGTGCGA GCATTCCGGT CACACTACTA
CGCTGGAAAC CGCTGAATCG TTTTTAA
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| Protein sequence | MTSHTLDQFN SNNEKLSPWP WQVNDAELSF DIDSLGKKLK DLSQACYLVN HSEKGLGIAQ
TAEVTTSDSQ APLGSHPVSA FAPALGTQSL GDSNFRRVHG VKYAYYAGAM ANGIASEELV
IALGQAGILC SFGAAGLIPS RVEAAITRIQ AALPNGPYAF NLIHSPSEPA LERGSVELFL
KHKVRTVEAS AFLGLTPQIV YYRAAGLSRD EHGEIVIGNK VIAKISRTEV ATKFMEPAPA
KILQQLVSDG LISQDQMAMA QLVPMADDIT AEADSGGHTD NRPLVTLLPT ILALKDEIQA
KYQYKTPIRV GAGGGVGTPD AALATFNMGA AFIVTGSINQ ACVEAGASEH TRKLLATTEM
ADVTMAPAAD MFEMGVKLQV VKRGTLFPMR ANKLYEIYTR YDSIDAIPAD ERKKLEEQVF
RSSLDDIWAG TVAHFNERDP KQIERALDNP KRKMALIFRW YLGLSSRWSN TGEVGREMDY
QIWAGPALGA FNAWAKGSYL DDYKARNAVD LAKHLMVGAA YQSRINLLLS QGASIPVTLL
RWKPLNRF
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