Gene Shew185_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1398 
Symbol 
ID5369488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1681234 
End bp1682532 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content48% 
IMG OID640829597 
Productmajor facilitator transporter 
Protein accessionYP_001365611 
Protein GI152999930 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA AACTCATCAT TCTGTTTGTC CTCTGTACTT TCTTTGTTAT TTCCTTGATG 
ACCAACAGTA TGGGGCCGAT TTTCCCTGCG TTAATTGACA GTTATGCTAT CGGCCTGACG
TTGGCGGGGT TATTTCCCTT TGCGTTTTTT ATCGCCTACG GGGTGACATC GATTCCTGCG
GGGATTTTGG TGGACAAGTA CGGTGAAAAG CGAGTGATCA TCTTAGCCTT TAGCCTAGCG
TTTATCGGCG CTGTGACTTT TGTGTGTCTC CCTTCCTTTA GCATCGCCAT GTTTAGCCTG
TTTTGTATCG GCACTGGCAT GAGCTTATTG CAGGTAGCAG TGAATCCCTT ACTGCGCCAA
GCCGCGGGGC CAGAGCATTT TGCCTTTTTC TCCGTACTGG CCCAACTTGC CTTTGGCGGC
GCAGCGACCT TAGCGCCGCT GGTGTACCAG CATTTTGTCG CCTTAGATCA AGCCAGTGTT
ACATCAGCCA ACTATGTGCA ACAGCTATTG CCCGAGAACA TGAGTTGGCT CGCCATGTAC
TGGTTATTTG CCGTGGTCGC ACTCGCCATG GTGTTCTTTG CCAGCTTAGT GAAGATGCCC
AAAGTGGATA AATTGGCCGA TGAGTCGGCG GGTGCACTGG AGACCCATTT ACGCCTTTTC
AAAGATAAAA CCGTTTTGAA ATTCTTCTTC GCTATCGCCG CCTACGTTGC ACTTGAGCAA
GGGCTTGCTA ACAGTATCTC AGTCTTTTTG CTGCAATATC ATGGTCTTGA CACCTTAAGT
GTCGGCGCCA ATGTGGTTAG CGATTTTTGG TTTTACATGA CGCTCGGCTG CCTACTCGGT
TTGCTGCTAC TTAAACTTAT CGACAGTCAG ATCTTGCTGC TCAGTTTTTC CCTTAGTTCA
CTGGTTTGTT TTCTGGTGGC GATTTGGGGA CCGAGCCAAC TAACATTAAT TTGTTTCCCA
TTGGTTGGCT TTTTCATTTC TATCATGTGG TCGGTGATCT TCTCGCTGGC GCTTAATTCG
CGCACTCAAG ATCACGGATC ATTCGCTGGC ATTCTCTGTA CTGGCATTAT CGGCGGCGCG
TTTATCTCGC CGATCATTGG TGTTATCAGT GAGCAGTCCG GCGAGTTACG GTTCGGGATG
TTAGTGCTGT TAATCCCTAT GGCTTACATA GGTTATGTCG CGCTAACGGC TCGCCCCTTG
ATTAAAAACA CCACCCTATT TTCAACAAAA GCGGCATCAA AGAATGACGG TTCTAAGCAG
ATGGCGACAA CCAACACGAG AGGCAACAAG CTATTATGA
 
Protein sequence
MKHKLIILFV LCTFFVISLM TNSMGPIFPA LIDSYAIGLT LAGLFPFAFF IAYGVTSIPA 
GILVDKYGEK RVIILAFSLA FIGAVTFVCL PSFSIAMFSL FCIGTGMSLL QVAVNPLLRQ
AAGPEHFAFF SVLAQLAFGG AATLAPLVYQ HFVALDQASV TSANYVQQLL PENMSWLAMY
WLFAVVALAM VFFASLVKMP KVDKLADESA GALETHLRLF KDKTVLKFFF AIAAYVALEQ
GLANSISVFL LQYHGLDTLS VGANVVSDFW FYMTLGCLLG LLLLKLIDSQ ILLLSFSLSS
LVCFLVAIWG PSQLTLICFP LVGFFISIMW SVIFSLALNS RTQDHGSFAG ILCTGIIGGA
FISPIIGVIS EQSGELRFGM LVLLIPMAYI GYVALTARPL IKNTTLFSTK AASKNDGSKQ
MATTNTRGNK LL