Gene Shew185_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1392 
Symbol 
ID5373427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1674797 
End bp1675228 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID640829591 
Productferric uptake regulator family protein 
Protein accessionYP_001365605 
Protein GI152999924 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAG TATTGAAAGA CTCGGGCCTC AAAGTCACCA CTCAAAGATG CAAGTTGCTT 
AAGTTTTTAA CTCAAGTCGA TAAGCAACAT TTAACCATCG AAAATATCTA TCAGGGGTTA
AATGCGCAGG GCGAGACCAT GGGCCTGAAT ACTGTGTACC GAATCATGGC GCATTTCGAA
CAAGCCGGCT TAGTGGTAAG GCGGCTTTTT GAGTCTGAAA ATGCGATGTA TGAGCTCAAT
GGGAAACCGC GTCATGAGCA TTTAATCTGC TTAACTTGCG GCAAGTTAGT TGAGTTTGCC
GATCCTTTGA TTGACTTACG TTTATGGTTA GCAGCTGAAC GTCACGGTAT GAGTATCGAT
CATCACAGCC TTAATATTTA TGGTCACTGT TTTGATTGTA AGCAAAAGCT TGAGAGCAAA
TCGGGTAGAT AG
 
Protein sequence
MQAVLKDSGL KVTTQRCKLL KFLTQVDKQH LTIENIYQGL NAQGETMGLN TVYRIMAHFE 
QAGLVVRRLF ESENAMYELN GKPRHEHLIC LTCGKLVEFA DPLIDLRLWL AAERHGMSID
HHSLNIYGHC FDCKQKLESK SGR