Gene Shew185_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1379 
Symbol 
ID5372686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1661525 
End bp1662115 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content45% 
IMG OID640829578 
ProductTetR family transcriptional regulator 
Protein accessionYP_001365592 
Protein GI152999911 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAA GTTGTAATTT TGATCGGCGG GAAAAACTCA TATTGGCAAT GGAGCTTTTT 
TGGCAAAAGG GCTTTGCCGA AACCTCGATT TCCGATCTCG TCGGCCATTT AGCCATTAAT 
CGATTTAGCC TTTATAACAG TTTCGGCGAC AAGCAAAAGC TATACCGCGA GTGCCTCAGT 
TTCTACCTCG ATAACTACTC CTTTGGCGCC TCAGATACCC TGCTGCATGA AAAAGCAGGC 
TTGGCCGAAA TAGCAGCTTA TCTAGCCCGC TTTGTTGCCC TGCAGAGGGA ACAAAAATAT 
GGCTGTTTTA TGCAAAATGC CGTATTAGAA AAGAGCCTCG ACGATGAGAG TGTGCTGCAG 
GAATGTCAGC GCTTATTTTG CCGATTACAG GCCTCATTCA CCCAAGTGTT GTTGGACTGC 
CAAGCGCGAG GCGAGTTATT GGCCAATTTA CAGCCGCATC AGGTCGCTGC ATTTTTAGTA 
CTGCAATTAC AAGGAATTAG AGTGTTAGGT AAAGCGGGTG AATATGAACT GCTAGACAAT 
GCATTCGCAG TATTGCAGGG CTACTTAGGC AGTTTAAATA CAAAAGTTTA A
 
Protein sequence
MARSCNFDRR EKLILAMELF WQKGFAETSI SDLVGHLAIN RFSLYNSFGD KQKLYRECLS 
FYLDNYSFGA SDTLLHEKAG LAEIAAYLAR FVALQREQKY GCFMQNAVLE KSLDDESVLQ 
ECQRLFCRLQ ASFTQVLLDC QARGELLANL QPHQVAAFLV LQLQGIRVLG KAGEYELLDN 
AFAVLQGYLG SLNTKV