Gene Shew185_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1365 
Symbol 
ID5369591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1641998 
End bp1643296 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content48% 
IMG OID640829564 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001365578 
Protein GI152999897 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000304613 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACT CTTATTCAGG GTACCGGTTG TTTACGCGCT TAGCCTTATA TCTACTGCTT 
TGCGCGCTAA TAGGTTTATT GGTAGGGAAA CTTCTCTGGA TACTCTTTTT CGGCATGCTA
GGGCTGGTTT GCTGGCATTA CCGACAATTA TCACGGCTTA ACTTTTGGTT ATGGCGCGAT
AGAAAACTCA CGCCGCCGCA GGGCAGTGGG AGTTGGGAAG GGGTGTTTAA CGGTATTTAT
CGCCTCCAAG GTAAGAATCG TCGACGTGTC GGTCAATTGG CGGCATTGCT GGCGCGATTT
CGCCAAGGTG CAGAAGCGTT ACCCGATGCC GCTGTGGTGC TCGATTCAGA GCATAATATT
TTATGGTGCA ACAAGTTAGC GCAGCTTATT CTCGGCTTTG TTTGGCCGCA GGATAATGGC
CAGCGTATTG ATAACTTGAT CCGCCATCCT GATTTTTCCG CTTATATTAA ATCTGCACAA
TACAAAGAGC CGCTGGAGTT ACCTTCGCCG GTATCGGATA GGCGTTTGCT TGAGATCCGT
ATCATGGCCT ACGGTGACAG GCAGCTACTG TTAATTGCGC GGGATATCAC TCGTATACGT
CAGCTCGAGG GCATGCGTAA AGAGTTTGTC GCCAATGTGT CACATGAATT AAAAACGCCG
CTCACTGTGT TGCAGGGTTA TCTCGAAATG ATGCAAAGCA TGGCTGAGCC CGATTCGATG
AACGTCAAAC CGCTGGCCTT AATGCAGCAG CAGACGCGGC GAATGCAATC TATGGTCGAA
CAGCTATTAA TGTTATCGCG GATTGAAGAT GCGGCCGATA TCAACCTCGA ACATACAGTG
AACATGACGC AGCTGATGGA AGTGCTCAAG GAGGAAGCTA AAGCGCTGGC ACAAGACAGA
TACGAGCTGA GCTTCTATTG CGAACCAGGG CTTGATTCCC ACGGTAATGA ATTACAGCTA
AGAAGTGCTT GTTCAAACTT GATTTCTAAC GCGATTCGTT ACACTGAACC CGGTGGTAAA
ATCACAGTGC AGTGGCGCAG TATGGCAACG GGAGCCATTT TTAGCGTAAC GGATACGGGC
GAAGGCATTG CACCTCAGCA CATAGGTCGA TTAACTGAAC GTTTTTATCG GGTAGACAGT
GCGCGCTCAA GGCAAACCGG TGGCAGTGGT CTAGGTCTTG CGATAGTAAA ACATGCGCTT
AACCATCATC ACAGTGAGCT TAAAATCAGC AGTGAAGTGG GTAAAGGCAG TACGTTTAGC
TTTGTTATTC CTTTACATCT TATCGAGCGT AAGAAGTAA
 
Protein sequence
MSDSYSGYRL FTRLALYLLL CALIGLLVGK LLWILFFGML GLVCWHYRQL SRLNFWLWRD 
RKLTPPQGSG SWEGVFNGIY RLQGKNRRRV GQLAALLARF RQGAEALPDA AVVLDSEHNI
LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSAYIKSAQ YKEPLELPSP VSDRRLLEIR
IMAYGDRQLL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQSMAEPDSM
NVKPLALMQQ QTRRMQSMVE QLLMLSRIED AADINLEHTV NMTQLMEVLK EEAKALAQDR
YELSFYCEPG LDSHGNELQL RSACSNLISN AIRYTEPGGK ITVQWRSMAT GAIFSVTDTG
EGIAPQHIGR LTERFYRVDS ARSRQTGGSG LGLAIVKHAL NHHHSELKIS SEVGKGSTFS
FVIPLHLIER KK