| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1361 |
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| Symbol | |
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| ID | 5369915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1636820 |
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| End bp | 1638637 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829560 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001365574 |
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| Protein GI | 152999893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.223478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCCA ACAGATTATC AATCTTGATA TTAAGTGCAT TATTCTCGGG CCAAGTATTG
GCCGATGTGA AATATCAAAT CGACCTCGTT AAACCCGAGC ATCATATTGC CCAAGTGAGT
GTGACTTTTC CTGAAGTGAA TACCAGCGAT TTTACGGTCA ATCTGCCAGT GTGGCGCACG
GGTAAATATC AAGTATTGCC TTTGGCCGAC GGTGTGCGTT TATTTAGCGC TAAAGACAAT
CAAGGTCATG AACTCCCATG GAAACGTACG GCGAGCGGTG AATGGCAAGT CGCGCTCACG
CAGCCAACCA GTGTAACGGT TAGTTATCAG TTGTATGCCA ATGAATTAGG CCAAAGGGTT
CGCCATATTG ATGCGAGCCA CGCGTATTTA GATGCCAGCG GCGTGTTCAT GTATAGCCCG
CAATTTCGCT CTGAGCCTGT ATCGGTTCAA TTGAACGTTC CTGAAACGTG GCAAAGTTAC
TCGGGTATGG CTTCAGGCAC GCCAGCGCAT TCTTTTATCG CGCAAAATTA CGATGTGTTA
ATTGATTCCC CTATCGAAAC CGGTGTGAGC ACCCATAAGC AATTTAGTGC TAATGGCAAA
AACTATGAGT TAGTATTTTG GGGTGAAGGT AACTATGACG CCGATAAAGT CGTTAAGGAT
TTAACGGCAT TAAGTGGTCA AGCAAAGGCG ATTTGGGATG ATTATCCCTT TGATCGTTAT
GTGTATATGG TGCACGCCAC TAGCGGTGCC AGTGGCGCGA CAGAACATTT AAATTCTACG
GTTATCCAAC TGCCGCGTTT TAGTTTCCGT GAGCGCAAGG ATTACCTACG CTTTATTAGC
ACAGCATCCC ATGAGTTTAT CCATACCTGG AACGTAAAGG CCTATCGTCC TGCGGGACTT
GTGCCCTATG ATTATCAGCA TGAAAACATG ACGGAATTAC TGTGGATGGC CGAAGGGTCT
ACCAGTTATT TCCAAGGCCA GTTACTGCTG CGTGCTGGGG TGATGACGCC TAAAGAGTTC
CTCGAAGACT TAGCTAAACG CGTTGAGAAA AACCAACTCA ACCCTGGGCG TGAAACTCAA
TCTGTTGCCG AAGCGAGTGC AGGGGAGTGG AGCAGTACGG GCGGTGATTA TGCGATTAAT
CACAGTGTGA ATATCTATTC TGAGGGTTAC TTAACCTCCT TAGCGTTAGA TTTCTCGCTG
CTCCAAGATA CTAAGCTAAA GCATTCATAC CGCGATGTGC ATCGCCGTTT ATATCAAGAT
CACCGAGTGC CAAAGGGCTA TGGAGTTAGT GATGTGCAGC ATATCCTTAA GGATTTATCC
GGCAAAGATT ATGCGCCTTG GTGGCAGGCA AACGTGAATA GCCCGATGAG CTTAGATTTC
CCTGAGTTGT TATCGCAGGC TGGGTTAGCA ATGTCCTATG GCAAAGATTC AAAAGTCGAG
GCATTTGCCG GCATGACGTT AAGCAGCGCC CATGGATCTT TAGTGTTGGA TCAAGTACTG
CGTAATGGCC CAGCGTGGCG AGCGGGTATC GTCGCGGGGG ATGAAGTATT AGCGATTAAT
GGTCTTAAGG TGACGGCAGC GGGTTTTGAT AAGCGCATTA ATGACTTTAA GACTGGCGAT
AGCATTGAAG TGACACTATT CAGCAATGAT AAAATCAAGC AAGTTAAGCT CACCCTTGGT
GAACAGCAAA GCGGTAAGTT AGTGCTTAAG GGCGATGCGA AAGCGACTAA ACAGCAAAAA
GCCTTCTTCA AGGCTTGGTT AGGCATTGAT TGGCCGTTCG ATAATAAAGG CGAGCTAGTG
TCTAAAGCCA ATGACTAA
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| Protein sequence | MKPNRLSILI LSALFSGQVL ADVKYQIDLV KPEHHIAQVS VTFPEVNTSD FTVNLPVWRT
GKYQVLPLAD GVRLFSAKDN QGHELPWKRT ASGEWQVALT QPTSVTVSYQ LYANELGQRV
RHIDASHAYL DASGVFMYSP QFRSEPVSVQ LNVPETWQSY SGMASGTPAH SFIAQNYDVL
IDSPIETGVS THKQFSANGK NYELVFWGEG NYDADKVVKD LTALSGQAKA IWDDYPFDRY
VYMVHATSGA SGATEHLNST VIQLPRFSFR ERKDYLRFIS TASHEFIHTW NVKAYRPAGL
VPYDYQHENM TELLWMAEGS TSYFQGQLLL RAGVMTPKEF LEDLAKRVEK NQLNPGRETQ
SVAEASAGEW SSTGGDYAIN HSVNIYSEGY LTSLALDFSL LQDTKLKHSY RDVHRRLYQD
HRVPKGYGVS DVQHILKDLS GKDYAPWWQA NVNSPMSLDF PELLSQAGLA MSYGKDSKVE
AFAGMTLSSA HGSLVLDQVL RNGPAWRAGI VAGDEVLAIN GLKVTAAGFD KRINDFKTGD
SIEVTLFSND KIKQVKLTLG EQQSGKLVLK GDAKATKQQK AFFKAWLGID WPFDNKGELV
SKAND
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