Gene Shew185_1360 details

Gene Information

• Locus tag: Shew185_1360
• ID: 5369437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 1634523
• End bp: 1636685
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640829559
• Product: TPR repeat-containing protein
• Protein accession: YP_001365573
• Protein GI: 152999892

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAC TCACGGTTAT TTTATTTACT TTGTTGCTGT CACTGCCTTT TAGCGTTCAA 
AGCCGAGATC TCGAAGCTGA TGAGGTGGAG TTAAGAGAAT CGCCACAGCA AATGTATGAT 
GTGCTCAACA AATCCATTTC CTTCCCCCTT GCGTTCCAAA ACCGTGACCA ATTTGAGCGT 
GCAGCCCAAG AACAAGGCTA CAGCCCAATC GAATTTGAAC AGATTTTGTA TCTGCTGACT 
CGGCTGAATA TGGAGCCGAA CGTGAAAACC AAGGTCGGTT TTCAAGACGC AAAAAGCTTG 
ATTGAACTCT TATCTACTGC GGCGCAATCG CCCTACGAAC TTGCTATGGT CGCCATGTTG 
AATGGTCGTT ACCTTGGCCG TACCGAACAG AAATATCAAG AAGCGATTGG CCTATATAAC 
GAAGCGCTCA CTCGCATCAA CGACAGTTAT GACATCGAAG CATTGATTCT TAAGCACAAT 
ATTCATGAGC ACTTAGGCGG CTTACATTTA TTGATCCGCC AAGAAGTACC GGCGTTGATG 
CACTTCCATA CATACCGCGA CATTGCCTAT AAGCTCAGAA ACGATTACTT AATCGCGGCG 
GCTGAAGCAA GACTGGGGTT CTATTACAAT TTTAATCAGC AGCTCACCAA ATCATTGCAG 
CATTACAGTG AAGCAATTCG GATCTCCAAT CGCTCTAATT ACCCGGCGAT GAAAACCAAT 
CTGCAATTGC AACTTTCTAA GGTATATCGC GATTTAAAGC AGTGGGATGA AGCCCTTAAA 
AATGCCCACG AAGCCGCTGC CGGTTTTAAA AAAATGGGCA ATGACACCTA TCTTTCAAGC 
TGTATGACAG TAATCGCTAT GGTCTATGGC GAACAAGGGG ATTGGAATAA AGCGATTGAT 
TACTACCTTA ATGCCCAGCA ATTAGATGCC AAACGCGGTA ACTATATTGC CCAAGGCCTT 
AATTTCCACA ATCTTGGGCA AGCCTACTCA AATATTAATG ACAATGTTAA CGCCCTAAAA 
TATTTACTGA TGGCCAATCA AATATTCAAA GAAAAACAAA GCCATCATTA TCAGGTTTAT 
AACGAACTCT TAATTGGCGA AATCGCGCAA ACTAACCAAG ATTGGCCGCT AATGATGACC 
CATGCCGACA TCGCATTGGC ATTGGCTATC GACTTAAAAC TTGTCAATGA ACAAAAAGCA 
GCCCTCACAC TAATTGCCTC GGCGTCGCAA AAATTAGGGG AATTAACCAA AGCCATCGAT 
GCCCAAACCC GTATCATAGA GCTAGGTAAC ACCCTTGCAG AGAAAGAGAA AGACTCACCA 
GTGTCGACCT CAGCCCTTGC GGAACAACAA CTCAAACTTG AGCTCAACAT GGTTCAGGGA 
AAACTTGCCG AGACAGTGAA GGAAAGCCAC AGCACCCACA CGCTACTGCT TATCTGCTGC 
CTCATTGCCG GACTCTTGCT GCTGGTGATT GCGTATATGT TGCATCATCG CCGCAAAACC 
ATGGCAAAAA ACGCCGCATT AACTCAATTG AGCCTACAGG AGCCCTTCAC CCATAACTTA 
GGCTATGCGG CGCTATTAGC GCACTTGGGC CATAATCAAC ATCAAGCGTC TACAACAGCT 
TTAGGGATTA TCGCCTTCCC CGCCCAGCTC ACGACCGATC TCGACTATGG CCAATATTTT 
AGTGATGCAG TAACAGCGCA ACTGGCCACT CATCTAACCG ATGTGCTCGC AGCACCTGTG 
TATGTGATAC GCCAAGGGGT ATTTGCAGTG CGTTTCACCC AAGCCGTTGA GCCAACGCAC 
GTGCTCAGCC AGATACGCCA AAAACTCGAC CAACAGCACA TCGTCCATCA TTTCCGGCTT 
GGTTTTGCCA CCTTGCCACT GTTAGCGAAA TCAGAAATCA AAATGGCCGC GAAATTAAAG 
TTCGAAACCG TGCAGATGGC GCTCGCCTGT GCCCGCAGTT TAGAGGGCAA TAACGATTAT 
TTTGTCGCCC TCAGAGCACT CGATTTTGTC CCTCTGAGCT TATTTGCCAA TCCGTTATTT 
TTACACCTTG AAAAAGGCAT TGAGCGCGGG TTAATCAGAT TAGATACCAA CGGAAATAAA 
GAGGATGTTC GCTGGCCTTG CTGGGAAAAT AACCAAGATA GGCAATTACT GGAAAATATT 
TGA 

 

Protein sequence

MQKLTVILFT LLLSLPFSVQ SRDLEADEVE LRESPQQMYD VLNKSISFPL AFQNRDQFER 
AAQEQGYSPI EFEQILYLLT RLNMEPNVKT KVGFQDAKSL IELLSTAAQS PYELAMVAML 
NGRYLGRTEQ KYQEAIGLYN EALTRINDSY DIEALILKHN IHEHLGGLHL LIRQEVPALM 
HFHTYRDIAY KLRNDYLIAA AEARLGFYYN FNQQLTKSLQ HYSEAIRISN RSNYPAMKTN 
LQLQLSKVYR DLKQWDEALK NAHEAAAGFK KMGNDTYLSS CMTVIAMVYG EQGDWNKAID 
YYLNAQQLDA KRGNYIAQGL NFHNLGQAYS NINDNVNALK YLLMANQIFK EKQSHHYQVY 
NELLIGEIAQ TNQDWPLMMT HADIALALAI DLKLVNEQKA ALTLIASASQ KLGELTKAID 
AQTRIIELGN TLAEKEKDSP VSTSALAEQQ LKLELNMVQG KLAETVKESH STHTLLLICC 
LIAGLLLLVI AYMLHHRRKT MAKNAALTQL SLQEPFTHNL GYAALLAHLG HNQHQASTTA 
LGIIAFPAQL TTDLDYGQYF SDAVTAQLAT HLTDVLAAPV YVIRQGVFAV RFTQAVEPTH 
VLSQIRQKLD QQHIVHHFRL GFATLPLLAK SEIKMAAKLK FETVQMALAC ARSLEGNNDY 
FVALRALDFV PLSLFANPLF LHLEKGIERG LIRLDTNGNK EDVRWPCWEN NQDRQLLENI