Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1329 |
Symbol | |
ID | 5370086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1593640 |
End bp | 1594401 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829528 |
Product | extracellular solute-binding protein |
Protein accession | YP_001365542 |
Protein GI | 152999861 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACCCA GCAAAGCCTT TGCACAAGTC ATCCTTTTGG CGCTCAGCAG CCTTTGCTTG ACTGCGCAGG CCAAAGACCT GCTGGCCGTG GGTACAAGCT TCAGCCAAAT TTTCGAACTA CAGCCCAATG GCGAATATAC TGGCTTAGGT GTCGATATTT TAAATCGCTT CGCCCAGCAG CAAAGTGTGA ACATTCACTA TCAGATTACC CCTTGGCGCC GTGCCATTTC TATGGTCGAA CGTGGCCAAG CGGATATTCT TATTGGTCCC TACGATACCC CAGAGCGTGA AGCAAACTTG GCTTTTGCGA CGAAAGCCTT TTACCGCGAT AATATGGTGT TCTATGCCCG TGTAGGCCAT GAAATAGTCT GGAATGGCGA CTATGCCAGC ATTAAAGGTC AACGGATTGG TAAGATGCAG GGGTGGAGTT ATGGCCCGAC GTTTAATGAA CAAACTAAAT CATTTAATAT CAATGAATTT GTCGATATTA AAAGCGGGAT AGAACGCCTC TCTCGGGGTG ATTTAGATTT ACTCGCCACA AACAGCCGCA ATACCGATGC CGTGCTCGCC CAAATCAAAA TCCCTAAGGC GATTACACCA ATCACACCGA TAATCGATGT CCAAGACGGT TATATGGCTT TTCCGAAGCA GGCGAAATTC GATCCCTTAA GACAAAGGTT TGACCGTTTT TTCGAGGACA TGATCCAAAA TGGCACCTTT ACGACACTCG GCCAAGAATA TCGTGTAACC TTACCTTACT AA
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Protein sequence | MIPSKAFAQV ILLALSSLCL TAQAKDLLAV GTSFSQIFEL QPNGEYTGLG VDILNRFAQQ QSVNIHYQIT PWRRAISMVE RGQADILIGP YDTPEREANL AFATKAFYRD NMVFYARVGH EIVWNGDYAS IKGQRIGKMQ GWSYGPTFNE QTKSFNINEF VDIKSGIERL SRGDLDLLAT NSRNTDAVLA QIKIPKAITP ITPIIDVQDG YMAFPKQAKF DPLRQRFDRF FEDMIQNGTF TTLGQEYRVT LPY
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