| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1322 |
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| Symbol | |
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| ID | 5371978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1579459 |
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| End bp | 1581660 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829521 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001365535 |
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| Protein GI | 152999854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.831141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGC CCACAGCTGA TGATATCAAG CTCAACCCTG ACGCTAAACA TAACCCTTCT
CAAAATGAGA AATGGGCCTT GGGAGCCGGT GAGCCTTTTC CGCTCGGTGC GAGTGTCGAG
GGTGATGGCG TCAACTTTGC GTTATTTTCA GCTAACGCGA CAGCGGTCGA GTTATGCCTA
TTTGATGACA ATGGCGAGCA AGAAATCGCG CGGATTGCGT TAACTGAACA AACCCAGCAA
ATCTGGCATG TGTTTGTGCA GGGGCTCAAG GCGGGGCAAC TCTACGGCTA TCGCGTTTAT
GGCTCCTATG AGCCTCAGCT TGGCCACAGA TTTAACCCCA ATAAGTTATT GCTCGACCCC
TATGCGCGCC AGCTGGTCGG TGAATATAGC GACCATGAGT CTAACTATGG TTACGAGCTG
AATCACAAGG ATGAAGACTT ATCTTTCAGT AAGTTAGATA ACGCTTCCCA TGTACCCAAA
TGTAAGGTCG TGGACATTCG TCCATTAATC GACATCGCCG CTAAGCAGTC GATTCAGCCT
ATCGCGACGA GGTTTCAGCC CAAACCCCTA GAGCGCAGCA TCATTTATGA GATGCACGTT
AAAGGTTTCA CTGCGGCGCA TCCTGAGATT GAACCTAATA AACGCGCCAC CTTTGCGGGC
TTGGCGACTC AGCCTGCTAT CGATTATTTG GCCGAACTTG GGGTGACGTG CATCGAGTTA
CTTCCAGTAC AGGCCTTTTT TACTGAACCA TTTTTGCTCG AGAAAAAGCT TACCAATTAT
TGGGGCTACA ACAGTATCGG TTTTTTTGCC CCCGAGCCGA GTTATCTGTC ATCCGACGAT
ATTGGTGAGT TTCGCGCTAT GGTGGATGCA CTCCACGGTG CGGGTATCGA AGTGATCCTC
GATGTGGTCT ATAACCACAG CGCCGAGGGC AGTCGACTTG GACCGACCTT TAGTTTTCGT
GGCATAGATA ATCTCAGTTA TTACCGCCTG CATCCGAATG ATAAGCGTTT TTACATTAAC
GATACGGGTT GCGGAAACAC CTTAAATATC AACCATCCAC GCATGTTGCA GCTCGTGTTA
GATTCGCTGC GTTACTGGGT AGAAATCATG GGCGTTGATG GATTTCGCTT CGACTTAGCG
GCCTGTTTAG GTCGCGAGGC CTATGGTTTT GATCCCGGCT CAGGTTTCTT CGATGCATTG
TTGCAAGACC CTGTGTTGTG CCGAGTAAAA TTGATTGCTG AGCCTTGGGA TATTGGCCCT
GGCGGTTATC AATTAGGTAA TTTCCCCGTG GCTTTTAGCG AGTGGAATGA CAGATATAGA
GACACTATGC GCCGTTTCTG GCGCGGCGAT CACAGCATGT TGCCCGAATT TGCTCGGCGA
TTTCATGGCT CGGGGGATTT CTTCGAGCAT GGCGGTCGTC CGCCTGCAAC CAGTCTTAAT
TTTTTAACCA GTCACGACGG TTTTACCCTC AAAGATTTAG TGAGTTATAC CCAGCGCCAC
AATTTGGCGA ATGGGGAAGA TAATCGCGAC GGTCACCAAG AAAACTTCAG TCATCATTAT
GGGATTGAAG GGGAAACCGA AGATAGCGAA ATTCTGGCAC TTCGCAGTCG TCAACAGCGT
AACTTATTGA CTACGCTATT TTTATCCCAA GGTGTGCCTA TGTTGTTGAG CGGCGATGAA
ACGGGCCGCA CCCAACAAGG TAACAATAAT GCCTATTGCC AAGACAATGA ACTGAACTGG
TTTGATTGGT CGGCAAAGGG CATGGACACT GAGCTGTTAG CCTTTACTCA GCAGCTTATC
GCCCTGCGCA AACGTTTCCC GTTGTTATGC GCTAAACGCT TCATTCATGA ACAGTTATTG
GCCGAATCTT TAGCCGATAC CGGTGCTCGC TTAGATTGGT TTAGTCGTCA AGGTGAGCAA
ATGACCAAGA GCCTGTGGAC TGAATCTATG TGTCGCAGTT TATCTGTGGT GCTTTCTGGT
GACTTAGAAG GCCAAGGTAA GCAGCAAGCT CTACTGTTGA TGGTCAATGC CGACGACAAC
CCTTTGGCAT TTACGCCGCC GACCTTTGAA CACTTGAGTC CGTGGCAATG CCTGATCCAT
ACCCAAACTG AGCCGCTGGA TGCTCAGATC TCTACGACGC GATACTTGCT GCAAGATCGC
AGTCTCATGC TTTTTCATGC TGATTTGATT TTCAAGAAAT GA
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| Protein sequence | MQKPTADDIK LNPDAKHNPS QNEKWALGAG EPFPLGASVE GDGVNFALFS ANATAVELCL
FDDNGEQEIA RIALTEQTQQ IWHVFVQGLK AGQLYGYRVY GSYEPQLGHR FNPNKLLLDP
YARQLVGEYS DHESNYGYEL NHKDEDLSFS KLDNASHVPK CKVVDIRPLI DIAAKQSIQP
IATRFQPKPL ERSIIYEMHV KGFTAAHPEI EPNKRATFAG LATQPAIDYL AELGVTCIEL
LPVQAFFTEP FLLEKKLTNY WGYNSIGFFA PEPSYLSSDD IGEFRAMVDA LHGAGIEVIL
DVVYNHSAEG SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNI NHPRMLQLVL
DSLRYWVEIM GVDGFRFDLA ACLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP
GGYQLGNFPV AFSEWNDRYR DTMRRFWRGD HSMLPEFARR FHGSGDFFEH GGRPPATSLN
FLTSHDGFTL KDLVSYTQRH NLANGEDNRD GHQENFSHHY GIEGETEDSE ILALRSRQQR
NLLTTLFLSQ GVPMLLSGDE TGRTQQGNNN AYCQDNELNW FDWSAKGMDT ELLAFTQQLI
ALRKRFPLLC AKRFIHEQLL AESLADTGAR LDWFSRQGEQ MTKSLWTESM CRSLSVVLSG
DLEGQGKQQA LLLMVNADDN PLAFTPPTFE HLSPWQCLIH TQTEPLDAQI STTRYLLQDR
SLMLFHADLI FKK
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