Gene Shew185_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1318 
Symbol 
ID5370365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1572883 
End bp1573359 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content49% 
IMG OID640829517 
ProductMarR family transcriptional regulator 
Protein accessionYP_001365531 
Protein GI152999850 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT ACGAACAACT GCTCATTTCG CTGCGTCGAG TGATACGCGC TATAGACATT 
CATTCTCGCC AGCTGAACAA ACATTCAGGT TTAACTGGGC CGCAATTGAT GGTGATGCAA
AAAATCGCCC AGTTGGATGC GCCATTGGCG AAAACTGTGG CGGAAGAAAT TACGCTGAGC
CCTGCGACTG TGACGACCAT TATCGATCGT CTCGAGGGCC GTGGTTTAGT GATCCGTTTG
CGCAGTGAGA CTGATAAACG TAAGGTGCAT TTATACCTTA GCGATGCGGG ACGAGCGCTG
TTACAGGACT CACCTAAACC GTTACAGGAT CATTTTATTA AGCGTTATCA GAATCTTGAA
GAATGGGAAC AGAGTCAATT GCTCTCTGCC GTTGAGCGTA TCGCGACTAT GATGGACGCC
GATAAAATTG ATGCGGCGCC TATGCTCTTG GTCGGGAAGA TCCAAGGCGA CGAGTAA
 
Protein sequence
MEKYEQLLIS LRRVIRAIDI HSRQLNKHSG LTGPQLMVMQ KIAQLDAPLA KTVAEEITLS 
PATVTTIIDR LEGRGLVIRL RSETDKRKVH LYLSDAGRAL LQDSPKPLQD HFIKRYQNLE
EWEQSQLLSA VERIATMMDA DKIDAAPMLL VGKIQGDE