Gene Shew185_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1305 
Symbol 
ID5370175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1553655 
End bp1555424 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content49% 
IMG OID640829504 
Productpotassium efflux system protein 
Protein accessionYP_001365518 
Protein GI152999837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00534275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGT CGAGTTTACT CACGTCGGTG CTGCTATTTT TATTGGCGGC GGTTATTTTT 
GTTCCTTTGG GTAAACGTTT TGGCGCCGGC CCGATTCTTT CCTACCTAGG TGCTGGCATC
ATTTTAGGCC CAGGCGGCAT GGCCTTAGTT TCTGATCCTG CTGCTGTATT ACATTTTGCC
GAGTTAGGTG TAGTGCTGAT GTTGTTTGTA CTTGGGCTCG AATTGAATCC AAGTAAATTA
TGGGAACTTC GCAGTGCTAT CTTTGGTTTA GGTAGTGGTC AGTTATTGTT GTCATGGGCT
GCGATTGGTG GTTTAGCTTG GGGCTTTGGC TTGTCTGTTG ACGCAGCTTT AGTGGTTGGC
GCCGCGTTAT CTTTATCATC GACAGCCTTT GCTGTGCAGT TAATGAGTGA ACATAGATTG
CTCACAACCC CACTCGGGCG TGATGCCTTT GGTGTCTTGT TAATGCAAGA TCTTGCCGTT
ATCCCTATGT TGCTGCTGAC GGCATATTTG GCGCCTAATT CGGCGCAGAT TGAACATCAT
GCCGTGCCTT GGTACTGGAC GTGTCTAGCC CTAGTAGGGT TTGTGTTAGT GGGCAAATAC
TTACTGCCAA AACTCCTTAA GTTAGTCGCA AGCAGCGGGG TACGTGAAGT ACTCACCGCC
TTTGCGTTAT TGCTCGTGAT GGGCAGCGCT GAGTTAATGG AGTGGCTTGG ACTCTCTGCG
GGTATGGGGG CATTTTTGGC GGGTATTATG CTCGCAAACT CAAGTTATCG ACATCAACTT
GAAACCGACA TCGAACCCTT TAAAGGCTTA TTGCTTGGGC TGTTTTTCAT GGCGGTCGGT
ATGAGTATGG ATTTGAAATT ATTGATATCA GATCCGTTAC TTATCTTAGG TATTTTAATG
GCGATGCTGC TGATTAAAAC GTTTGTGCTG ATGGTGCTGG GCCGCATTCG GCACCACAAA
TGGCGCCCGA GTATTGCATT GGGGTTGATC CTTGCCGAAG GCGGTGAATT TGCCTTTGTG
CTGTTATCCC AAGCGCAGTT ATCTGGCATT GTCGGCGATA AAATTGCGCA AGTGCTAGTG
TTGGCGATTG GTTTGTCTAT GGCGGTGACG CCGATATTGT TTACCCTGTT TCGCGCAACT
AAGGCAAAGG TGGTGGACAC TCGCCTGCCA GATACGATTA ATGTCACTGA ATCGGAAGTG
GTGATTGCCG GTTTTGGCCG AGTAGGCCAG ATAACCGGGC GTATTTTGGC CTCCTCTGGG
ATCCCTTTTG TCGCATTGGA TAAGGATGCG AGCCATGTGG ATGTGATTCG CAAATATGGC
GGTGAGGTCT ATTTTGGTGA TGCCAGACGC TTAGACATGT TGATGTCGGC GGGGATCGCG
CGCTCGCGTT TGTTATTGCT GGCCGTGGAC AGTGTTGAGG ATTCCATCGA AATCGCCCAG
CAAGTGAAAA CCCATTTCCC TCATATCCAC ATAGTCGCGC GGGCAAGGGA TCGTAACCAT
GCTTATCGTT TGATGAGCCT TGGGGTGACA GATGTCTTTC GTGAGACCTT TGGCTCGGCG
CTCTCGGCCA GTGAGAAGAT CCTCCAAGGT TTAGGTCTAT CTCAGGTACA AGCCAATGAG
CGGGTAAAAA TCTTTGCTGA GCATGATAAG AAACTGGTGA TTGCCAGTGC AGCTCATCAA
AATGATTTAG CGACGTTAAT CAATCTATCG AATAAGGGTA AGGCAGAGTT GGAATCCCTT
ATGCGCGGTG ATAGGGAGAA TGTCAGTTAA
 
Protein sequence
MEQSSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLGAGI ILGPGGMALV SDPAAVLHFA 
ELGVVLMLFV LGLELNPSKL WELRSAIFGL GSGQLLLSWA AIGGLAWGFG LSVDAALVVG
AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTAYL APNSAQIEHH
AVPWYWTCLA LVGFVLVGKY LLPKLLKLVA SSGVREVLTA FALLLVMGSA ELMEWLGLSA
GMGAFLAGIM LANSSYRHQL ETDIEPFKGL LLGLFFMAVG MSMDLKLLIS DPLLILGILM
AMLLIKTFVL MVLGRIRHHK WRPSIALGLI LAEGGEFAFV LLSQAQLSGI VGDKIAQVLV
LAIGLSMAVT PILFTLFRAT KAKVVDTRLP DTINVTESEV VIAGFGRVGQ ITGRILASSG
IPFVALDKDA SHVDVIRKYG GEVYFGDARR LDMLMSAGIA RSRLLLLAVD SVEDSIEIAQ
QVKTHFPHIH IVARARDRNH AYRLMSLGVT DVFRETFGSA LSASEKILQG LGLSQVQANE
RVKIFAEHDK KLVIASAAHQ NDLATLINLS NKGKAELESL MRGDRENVS