| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1304 |
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| Symbol | |
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| ID | 5371719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1551574 |
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| End bp | 1553319 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640829503 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001365517 |
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| Protein GI | 152999836 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00414858 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTAA TGGCTGCAAC TATCAATTTT GATGAGGCGT TAGCTGATCT GGAGCAGCTA
CAACATACCG ATATGCAAAG TGCAATCACT AAGCTCCATG AACTTGAAGC TGATTTCGAG
CATATGACGC GTTTTCAGCA AGGTCGTTTA TTAGTGTTTA AAGGGACTTC ATTTATTTAT
GCTGGTAAAT ATCAAGAAGC CTTAGATAAT TTAATTCAAT CTGAAAATTT AGTTCAAAAT
AGCGATTATT TATTTTCTGC CTATAGCTAT GAGGCAACAG CTTACATCGC CCTTAGGAAC
TTTAAAGACG CATTTGTTGT AATGAGCAAA AGTCTAGGGT TAATAGGCCG AATAGAAAAC
ATAGACATCA AACGTGCTGC ATATCTACGT TTAGCCAGTT TATACTCTGC AATGGGTATT
AAGGAAGAGG TGGGAAGCTA CGCAGCTAAG GCAGAATCGC TTGCTTCTGC AGATGATGTA
AAAGATATCT GTACTGCAAA GTTGTATTTA TCTGTTTATC AATTAGAGCT AGAGGCCTTT
ACTAAGGCGT TTGATGAATT CCAGTACACG CACGATTTTT GTGAGTCGAA TGGCTTCCCA
TTGATTTCGT TTATTGCATT GAAAGGGATG GGGGAGTCTA AGCTAAGGTT ACAAGAATAC
TCTTCTGCAG TTGCTTTACT TTTGAAAGCA TTAAAGGGAT ATGAGTCTTT TAATTTTCAA
CTAGAAATTA ATAGTGTCCA TTCTTTGTTA ACCGAAGCGT ATTTTGCACT AAAGCAATCT
GCTGAGGTGG TCGAGCATGC CAAGTTCGTA ACGTCATTAC CTAATGATCC TAGTTATACC
GAGTTAAAAC ATACTGTCTT TAAAGTGTTA GCGGGCTTAA ATGCTGAGAA TAAACAGTTT
GAACAAGCCT ATGAATACTC GAAAAAAGAG CAGTATTACA ATCAGCTGAT GTTTGATGAA
GCGAAAATGA AAACGTTAGC GTATCAGGCG GCAAAGTTTA ATGCTGATGA ACAGTCACGT
GAAATTAATT TATTGAATAA GGAACGTGAA CTGTATGTCG CTCAGCAAAC GGTAAAAGAG
CGCGAATACA CCAATATGCT GATGTTTGTC ACTATTCTAG TAGGCGGACT GTTCTTCCTC
GGGATTTTGT TAGCTGTAGG CCAGATGCAG AAACGCAAGT TTATGCGTAT GGCGAGAATG
GATGCATTAA CAGGCATCTT GAATCGCGGT GCAGGGCAAG AATTAGGGGA AAACCTTTTT
GTGCAAGCCA CGGCCCGCGG TGGGGATTTC TGTGTCATTT TATTTGATTT GGATTTCTTC
AAACGGATCA ACGATTCTTT TGGCCATGGA ACTGGCGATT GGGCGCTTAA AAAGGTGGTT
GATTCCCTTA AATCCCATAT CCGAAATGGT GATGTTTTTG CTCGTATCGG CGGTGAGGAG
TTTGCGATTT TATTACCCTA TGCCGATGAA GAGAAAGGCA TGGAAGTGGC GGAGCAGTGC
CGAGCCCGTA TCGAGGCCAT TGATACCCAA CATTCAGGAC ATAAGTTCGT CATTACGGCG
AGTTTTGGCG TGAGCGGTTT AATGGCTGAT GATCTGAGTT TGGACCCATT ATTTCACCGA
GCCGACATGG CGCTTTATGC CGCTAAGGCC AATGGCCGCA ATGCCGTAGT ACGCTATTCT
GACATTTTAA AATGTGACAA GCAGGCAACT GATTTACGGC GTCATATCGC ATCGCCCTCG
GTGTAA
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| Protein sequence | MPLMAATINF DEALADLEQL QHTDMQSAIT KLHELEADFE HMTRFQQGRL LVFKGTSFIY
AGKYQEALDN LIQSENLVQN SDYLFSAYSY EATAYIALRN FKDAFVVMSK SLGLIGRIEN
IDIKRAAYLR LASLYSAMGI KEEVGSYAAK AESLASADDV KDICTAKLYL SVYQLELEAF
TKAFDEFQYT HDFCESNGFP LISFIALKGM GESKLRLQEY SSAVALLLKA LKGYESFNFQ
LEINSVHSLL TEAYFALKQS AEVVEHAKFV TSLPNDPSYT ELKHTVFKVL AGLNAENKQF
EQAYEYSKKE QYYNQLMFDE AKMKTLAYQA AKFNADEQSR EINLLNKERE LYVAQQTVKE
REYTNMLMFV TILVGGLFFL GILLAVGQMQ KRKFMRMARM DALTGILNRG AGQELGENLF
VQATARGGDF CVILFDLDFF KRINDSFGHG TGDWALKKVV DSLKSHIRNG DVFARIGGEE
FAILLPYADE EKGMEVAEQC RARIEAIDTQ HSGHKFVITA SFGVSGLMAD DLSLDPLFHR
ADMALYAAKA NGRNAVVRYS DILKCDKQAT DLRRHIASPS V
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