Gene Shew185_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1299 
Symbol 
ID5371787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1548663 
End bp1549100 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content42% 
IMG OID640829498 
Productcyclase/dehydrase 
Protein accessionYP_001365512 
Protein GI152999831 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAA TTTCTCGAAG TGTGTTAGTC CGTTTTAGTG CGATGCAAAT GTATGACTTA 
GTGAATGATG TCGAGTCGTA TAAGGAATTT TTACCCGGTT GTGTGGGTGG TAAAGTCTTA
GAATTTGATG GTAAGACTAT GTTGGCATCT GTGGATGTGA GTAAAGCGGG GATCCGTAAG
ACATTTACGA CTCGCAACCA AGTGGTTCCC GGGAAGAGTA TTGATTTAAC ATTGGAAAAT
GGGCCCTTTA AGCATTTATT GGGGCAGTGG CGTTTTACTG AGCTGACTGA AGAAGCTTGC
AAGGTAGAAT TCGAACTGAG TTTTGAGTTT TCAAACTCGT TAGCCGATAT GGCCTTTGGT
AAAGTGTTTA ATGATCTTAT GGTATCAATG GTGACGGCGT TTACGAGTCG CGCTAAGGTG
ATTTACAGTG ACAAATGA
 
Protein sequence
MPQISRSVLV RFSAMQMYDL VNDVESYKEF LPGCVGGKVL EFDGKTMLAS VDVSKAGIRK 
TFTTRNQVVP GKSIDLTLEN GPFKHLLGQW RFTELTEEAC KVEFELSFEF SNSLADMAFG
KVFNDLMVSM VTAFTSRAKV IYSDK