| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1296 |
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| Symbol | |
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| ID | 5370747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1545266 |
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| End bp | 1546501 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829494 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001365509 |
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| Protein GI | 152999828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTA GTGTCTTATC CTTAAACTCC ACATTAGTGA ATACCTTAGC GAGTCTTGGC
TATGAGTCGC CAACGCCTAT CCAGCTAGAA GCTATCCCTA CCATCTTGGC GAAACGGGAT
GTGATGGCTG GCGCCCATAC GGGCACAGGC AAAACCGCAG CATTCGCCTT GCCCATCTTG
CATCATTTGT TGGCACTCAG CCCTTTGCAA GAGTTAACTG CGGTGAGACC CGTACGCGCA
TTAGTCTTAG TGCCGACACG TGAGCTGGCA GTGCAGGTAC AACAGAGTTT TGTTAAGTAC
GCTAAAGGGA CAGATATCCG TGTCGGCATC GCCTACGGCG GCGTGAGTAT CGATGCGCAG
GTCGCTGTGT TTAATGCAGG GATAGATGTG TTAATCGCAA CACCGGGTCG CTTACTCGAT
CACCTCAGGC AAGGCGCATT GAGTCTTAAG CAATTGAGCG TGCTTGTGTT TGATGAAGCC
GACCGTATGC TCGACATGGG CTTTATGGAT GAAATTCAAG CCGTGCTCAA GCAAGTCCCG
AGTGACAGAC AAACGTTATT ATTTTCTGCC ACCTTAGATG CCGCCATCTT TAGCTTAAGT
AAAACCTTAC TGCGCGATCC CAAGTTGATT GAAGTAGCCA AGCGCAACAC GACCGCTGCC
GAAATTGAGC AAGTGGTTTA TGCCGTCGAT GCCGACCGTA AAACCGAACT CGTCAGCCAT
CTGGTACGCA GTAAAAACTG GCATCAAGTG CTGATTTTTA GTCGGACTAA GCAAGGCGTA
GATAAACTGG TTCAGCAACT CAATAAAGCC GATATTATTA CTCAGGCGTT TCACGGTGAC
TTGTCCCAAG GTGCACGCGA GAAAGTCTTA CAGGAATTTA AGCAAGGCAA GATCCAAGTG
CTAGTGGCCA CGGATGTCGC CGCCCGAGGC CTAGATATCG TTGAACTCAA ATACGTGATT
AACTTTGAGC TGCCTTTTAT CGCCGAAGAT TACATTCATC GTATTGGCCG CACAGGTCGA
GCGGGCAGTG CAGGGCTTGC GATCACCCTG TTTAGCCAAG AGGACGCCCT ATTACTGGAA
GAAGTCGAAG TCGTATTAGA CAAGCGTTTA CCACAGCAAT GGTTACCCGG CTTTGAACCC
GACTTTAATA AAATGGACAC CGAACCAAGA CGTAACGGCA AAGCGGCTCA AAAACAACGT
GCTAAAAAGC GCGCTCTGGG CGGTAAGAAA CGTTAA
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| Protein sequence | MSFSVLSLNS TLVNTLASLG YESPTPIQLE AIPTILAKRD VMAGAHTGTG KTAAFALPIL
HHLLALSPLQ ELTAVRPVRA LVLVPTRELA VQVQQSFVKY AKGTDIRVGI AYGGVSIDAQ
VAVFNAGIDV LIATPGRLLD HLRQGALSLK QLSVLVFDEA DRMLDMGFMD EIQAVLKQVP
SDRQTLLFSA TLDAAIFSLS KTLLRDPKLI EVAKRNTTAA EIEQVVYAVD ADRKTELVSH
LVRSKNWHQV LIFSRTKQGV DKLVQQLNKA DIITQAFHGD LSQGAREKVL QEFKQGKIQV
LVATDVAARG LDIVELKYVI NFELPFIAED YIHRIGRTGR AGSAGLAITL FSQEDALLLE
EVEVVLDKRL PQQWLPGFEP DFNKMDTEPR RNGKAAQKQR AKKRALGGKK R
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