Gene Shew185_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1292 
Symbol 
ID5371554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1537536 
End bp1538117 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID640829490 
ProductTetR family transcriptional regulator 
Protein accessionYP_001365505 
Protein GI152999824 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATG CAGAGTTCGA CCGAGAACAG GTACTTCGCG GCGCGATGGC CGCCTTCATG 
CACAAGGGTT ACACCAAAAC AAGCATGCAA GATCTAACTC AAGCCACGGG ATTACATCCG 
GGGTCGATTT ACTGCGCTTT TACCAATAAA CGCGGCTTAC TAATCGCGGC CATTGAGCAA 
TATCAACTCG ACAGAAATCA GCAATTTACC AGCCTGTTCG CCAATAGCAA AAATGTACTA 
ACGAACTTGA AAACTTATTT AGATCATATT GTTGCCGAAT GCCTAAGTTG TGATAGCGCC 
CAAGCTTGTT TATTGACGAA GGCATTAAAT GAAGTGGCTG AGCAAGATGT TGAGATTAGA 
GACATCATCA ATCAGTATCT GCAATCTTGG CAGCAAGCGC TAACGCAGCA GTTTACCAGC 
GCAGCCAAGC AAGGACTGCT AGAAGGTCAT CGCAGCGACG AGCAAAGAGC CCAATATTTT 
ATGATGGGAA TTTATGGTTT AAGGACCTTC GCTCACACCC ATCCAAATGC CGAAACCCTT 
CAACATCTTG CCGATCGATT ACTAACTGAA GTCTGCCATT AA
 
Protein sequence
MRNAEFDREQ VLRGAMAAFM HKGYTKTSMQ DLTQATGLHP GSIYCAFTNK RGLLIAAIEQ 
YQLDRNQQFT SLFANSKNVL TNLKTYLDHI VAECLSCDSA QACLLTKALN EVAEQDVEIR 
DIINQYLQSW QQALTQQFTS AAKQGLLEGH RSDEQRAQYF MMGIYGLRTF AHTHPNAETL 
QHLADRLLTE VCH