Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1287 |
Symbol | |
ID | 5370353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1531607 |
End bp | 1532116 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829485 |
Product | hypothetical protein |
Protein accession | YP_001365500 |
Protein GI | 152999819 |
COG category | [S] Function unknown |
COG ID | [COG4704] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0738123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACG TGAACTTAAC GATGACAACA ACTCAGATTC GCCGAGCCAA TATGACCAAA AGGACGTTAT CAGCGATTTG GGGCGCAGGC TTAGCTTGCT TGCTCTTGTC GGCAGGAAGT GTATCGGCAG GCACCATGTC CACAGGCAGC CAGACACATA CCCTGACTGT GGATATCGAT AATATTCAAG TACAAACCGG CGCCTTAATG GTTGAGGTTT ATGCTAATGC CGAGGATTAC GCCGCAGGCC ACAATCCTAG CGCTTCTATG ATAAAGCCCG TCACTAAGAC TGAGCATAGG CTGGTATTTA GCGATCTCGC CGATGGTCAA TATGCGGTCA AGGTCTTTCA CGATGAAAAC GGTAATCGCA GCTTAGATAC CAATATGTTA GGTGTGCCGA GTGAAGGCTA TGGTTTTAGC AATAACGCTG GCAGTTTTGG ACCTGCGAGC TTTAAAGACG CCAGCTTTAG TTTGCAGGCC GATGCGCAAA TCACTATACA TATTCGCTAA
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Protein sequence | MKHVNLTMTT TQIRRANMTK RTLSAIWGAG LACLLLSAGS VSAGTMSTGS QTHTLTVDID NIQVQTGALM VEVYANAEDY AAGHNPSASM IKPVTKTEHR LVFSDLADGQ YAVKVFHDEN GNRSLDTNML GVPSEGYGFS NNAGSFGPAS FKDASFSLQA DAQITIHIR
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