Gene Shew185_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1287 
Symbol 
ID5370353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1531607 
End bp1532116 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID640829485 
Producthypothetical protein 
Protein accessionYP_001365500 
Protein GI152999819 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0738123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG TGAACTTAAC GATGACAACA ACTCAGATTC GCCGAGCCAA TATGACCAAA 
AGGACGTTAT CAGCGATTTG GGGCGCAGGC TTAGCTTGCT TGCTCTTGTC GGCAGGAAGT
GTATCGGCAG GCACCATGTC CACAGGCAGC CAGACACATA CCCTGACTGT GGATATCGAT
AATATTCAAG TACAAACCGG CGCCTTAATG GTTGAGGTTT ATGCTAATGC CGAGGATTAC
GCCGCAGGCC ACAATCCTAG CGCTTCTATG ATAAAGCCCG TCACTAAGAC TGAGCATAGG
CTGGTATTTA GCGATCTCGC CGATGGTCAA TATGCGGTCA AGGTCTTTCA CGATGAAAAC
GGTAATCGCA GCTTAGATAC CAATATGTTA GGTGTGCCGA GTGAAGGCTA TGGTTTTAGC
AATAACGCTG GCAGTTTTGG ACCTGCGAGC TTTAAAGACG CCAGCTTTAG TTTGCAGGCC
GATGCGCAAA TCACTATACA TATTCGCTAA
 
Protein sequence
MKHVNLTMTT TQIRRANMTK RTLSAIWGAG LACLLLSAGS VSAGTMSTGS QTHTLTVDID 
NIQVQTGALM VEVYANAEDY AAGHNPSASM IKPVTKTEHR LVFSDLADGQ YAVKVFHDEN
GNRSLDTNML GVPSEGYGFS NNAGSFGPAS FKDASFSLQA DAQITIHIR