Gene Shew185_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1272 
Symbol 
ID5372170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1514932 
End bp1515894 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content50% 
IMG OID640829471 
Producthomoserine kinase 
Protein accessionYP_001365486 
Protein GI152999805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.140701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA CCGTTTATGC TCCAGCCTCT ATGGGTAACG TGGGAGTCGG ATTTGATTTA 
CTGGGCGCCG CTTTGGCGCC TATCGATGGC AGTTTACTGG GCGACAGAGT GACTATCGCG
GCGGCAGAGT CGGGTGTGAG TCTGGCGCAG ACTGGTGCTT GGGCCCATAA ACTGCCTGAA
AATCCGCAAG ACAATATTGT GTACCAATGT GCCGAATTCT TCTTAACCGC ACTGAGTAAG
GAGTATTTAG AAGCGCTTGG TAAAGCAGAT GAAGGCGTAG CGCTGACACT GGAAAAGAAC
CTGCCCGTTG GCAGTGGTTT AGGTTCGAGT GCAAGTTCAG TCGTAGCGGC GTTATATGCC
TTGAATGAAC ATTTTGACAG ACCTTACAGC GAGCAAGCCC TGCTGGAACT GATGGGCGAG
TTTGAAGGTA AGATCAGCGG CAGTGTGCAC TATGACAACG TCGCCCCCTG TTATTTGGGC
GGCATGCAAT TGATGCTCAA TGTGCCGGGC ACTGTATGTG AAGCGATACC GAGTTTTAAA
GAATGGTATT GGGTTGTGGC CTATCCAGGC ATTTCACTCT CAACGGCGAT GATGCGTAAA
CTTATGCCCG ACCAATACGA TAAAAGTGTC ACTATCGATT TTGGTCGTTA TTTAAGTGCC
TTTGTACATG CCTCTTATCA GCAGAATGCC AAGCTTGCGA TCAGCGTATT AAAAGATGTG
TTAGCCGAGC CTTATCGCGC CGCTGCGATT CCGGGTTACG ACAATGCTAG AGTTGCTTTA
GCCGATTTAG GCATGTTGAC TACGGGGATT TCCGGCAGTG GTCCAACGCT GTTTTCGATT
ACCGATGATT TAGCCACGGC AAATGCGGCT AAAACCTGGT TAGAACAGCA TTATTTAACC
GAGGTGGGTG GCTTTGCCCA CGTGTGTCGC CTCGATGAGC AAGGCACGCG TAGAGTCGAT
TAA
 
Protein sequence
MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AAESGVSLAQ TGAWAHKLPE 
NPQDNIVYQC AEFFLTALSK EYLEALGKAD EGVALTLEKN LPVGSGLGSS ASSVVAALYA
LNEHFDRPYS EQALLELMGE FEGKISGSVH YDNVAPCYLG GMQLMLNVPG TVCEAIPSFK
EWYWVVAYPG ISLSTAMMRK LMPDQYDKSV TIDFGRYLSA FVHASYQQNA KLAISVLKDV
LAEPYRAAAI PGYDNARVAL ADLGMLTTGI SGSGPTLFSI TDDLATANAA KTWLEQHYLT
EVGGFAHVCR LDEQGTRRVD