Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1272 |
Symbol | |
ID | 5372170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1514932 |
End bp | 1515894 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829471 |
Product | homoserine kinase |
Protein accession | YP_001365486 |
Protein GI | 152999805 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.140701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGA CCGTTTATGC TCCAGCCTCT ATGGGTAACG TGGGAGTCGG ATTTGATTTA CTGGGCGCCG CTTTGGCGCC TATCGATGGC AGTTTACTGG GCGACAGAGT GACTATCGCG GCGGCAGAGT CGGGTGTGAG TCTGGCGCAG ACTGGTGCTT GGGCCCATAA ACTGCCTGAA AATCCGCAAG ACAATATTGT GTACCAATGT GCCGAATTCT TCTTAACCGC ACTGAGTAAG GAGTATTTAG AAGCGCTTGG TAAAGCAGAT GAAGGCGTAG CGCTGACACT GGAAAAGAAC CTGCCCGTTG GCAGTGGTTT AGGTTCGAGT GCAAGTTCAG TCGTAGCGGC GTTATATGCC TTGAATGAAC ATTTTGACAG ACCTTACAGC GAGCAAGCCC TGCTGGAACT GATGGGCGAG TTTGAAGGTA AGATCAGCGG CAGTGTGCAC TATGACAACG TCGCCCCCTG TTATTTGGGC GGCATGCAAT TGATGCTCAA TGTGCCGGGC ACTGTATGTG AAGCGATACC GAGTTTTAAA GAATGGTATT GGGTTGTGGC CTATCCAGGC ATTTCACTCT CAACGGCGAT GATGCGTAAA CTTATGCCCG ACCAATACGA TAAAAGTGTC ACTATCGATT TTGGTCGTTA TTTAAGTGCC TTTGTACATG CCTCTTATCA GCAGAATGCC AAGCTTGCGA TCAGCGTATT AAAAGATGTG TTAGCCGAGC CTTATCGCGC CGCTGCGATT CCGGGTTACG ACAATGCTAG AGTTGCTTTA GCCGATTTAG GCATGTTGAC TACGGGGATT TCCGGCAGTG GTCCAACGCT GTTTTCGATT ACCGATGATT TAGCCACGGC AAATGCGGCT AAAACCTGGT TAGAACAGCA TTATTTAACC GAGGTGGGTG GCTTTGCCCA CGTGTGTCGC CTCGATGAGC AAGGCACGCG TAGAGTCGAT TAA
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Protein sequence | MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AAESGVSLAQ TGAWAHKLPE NPQDNIVYQC AEFFLTALSK EYLEALGKAD EGVALTLEKN LPVGSGLGSS ASSVVAALYA LNEHFDRPYS EQALLELMGE FEGKISGSVH YDNVAPCYLG GMQLMLNVPG TVCEAIPSFK EWYWVVAYPG ISLSTAMMRK LMPDQYDKSV TIDFGRYLSA FVHASYQQNA KLAISVLKDV LAEPYRAAAI PGYDNARVAL ADLGMLTTGI SGSGPTLFSI TDDLATANAA KTWLEQHYLT EVGGFAHVCR LDEQGTRRVD
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