Gene Shew185_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1270 
Symbol 
ID5373536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1511169 
End bp1511825 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID640829469 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_001365484 
Protein GI152999803 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000605052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA CTCAACACAG CGCGGTAACC ATTCATTACC GTTTATCAGA TCAAGAAGGC 
AGACTATTAG AAGACTCTTT CGACTCTGAA CCTATGCTAT ATCTGCACGG CACTGAAAAC
CTGATCCCAG GTTTAGAAGC CGCATTAGAT GGTAAAACCA AAGGCGAAAA ACTCGATGTC
ACTATTAGTG CCGAAGAAGC CTATGGCCCT TACCACGATG GCCTACGTCA AGCCGTGCCA
TTAGAAGCCT TTGGTGATAT CGAAGATATC GTCCCAGGTA TGCGCTTTAT CGCCGAAACT
GAAATGGGTC AACGCCCAGT TCAAGTCATG GAAGTGAAAG ACGATGTGGT TATCGTCGAT
GGCAACCATC CTTTAGCGGG CCAATCGCTC AATTTCAGCG TCGAAATCGT TGACGTTCGC
GAAGCCTCTG CCGAAGAAAT CGCCCATGGC CACATTCATG CCCAAGGCGG TTGTGGAAGC
CATGGACATG ATCACGATCA CGGCGGTGGA TGCTGTGGCG GTTCAGGCAA AGAAGAAGCT
GGCGGCTGTT GTGGTGGTTC AGACCACGAT CATGGACATC ACCATGAAGA GCATGAAGCC
TGTGACACAC CTAAAACAGG TTGTGACGGC AATGGCGGCT GTGGTTGCCG CGGCTAG
 
Protein sequence
MKITQHSAVT IHYRLSDQEG RLLEDSFDSE PMLYLHGTEN LIPGLEAALD GKTKGEKLDV 
TISAEEAYGP YHDGLRQAVP LEAFGDIEDI VPGMRFIAET EMGQRPVQVM EVKDDVVIVD
GNHPLAGQSL NFSVEIVDVR EASAEEIAHG HIHAQGGCGS HGHDHDHGGG CCGGSGKEEA
GGCCGGSDHD HGHHHEEHEA CDTPKTGCDG NGGCGCRG