| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1265 |
|---|
| Symbol | |
|---|
| ID | 5372898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1508157 |
|---|
| End bp | 1508513 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640829464 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_001365479 |
|---|
| Protein GI | 152999798 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000192142 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAGA TTACTAGCAA GCAACTTGAA GTCACATCTC CTATTCGCGA ACGTATTGAA
AGCCGTTTCG AAAAACTTTC AAGGCATGAT GTGCAAATGA TAAATCCCCA TGTAATCATT
ACGGAGGAGA AACCTGGTTT CAAAATTGAA GCATCGGTTG GCATCCCAAA TGGAGAACTC
TTCGCTCAAG CAAAACATGA AAATTTATAT ACTGCGATTA ACGCTATGGG CCAAAAATTA
GAGAAGCAGC TCAATCGCAT AACACACAAA CCGGAAGCAC AACGTTCCAC ATCATTAACA
CCTACTAATA ATATTGTTGA AGTTGACGAC GAGTACAAGG AGGAAGATGC GGCATAA
|
|---|
| Protein sequence | MLKITSKQLE VTSPIRERIE SRFEKLSRHD VQMINPHVII TEEKPGFKIE ASVGIPNGEL
FAQAKHENLY TAINAMGQKL EKQLNRITHK PEAQRSTSLT PTNNIVEVDD EYKEEDAA
|
|---|
| |