Gene Shew185_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1263 
Symbol 
ID5373432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1502903 
End bp1504207 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content47% 
IMG OID640829462 
Productsodium/hydrogen exchanger 
Protein accessionYP_001365477 
Protein GI152999796 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGTT ACCAAATTCT GTGTATCCTC TGCGCCTTGG CGCTAGTCAC TTCAGTTGTC 
TCTTCACGCG TCCATAAACT GCAGGAAACT GTGGCCATTA CGGCTATCGC CCTAGGCATG
AGTTTGTTAT TACTCCTAGG GGGAAAGGCC TTAGGCGGGC ATGTCTATTT GTATTTTGTC
TCAGGCTTAG AGAAGCTCGA TTTTCAAGCC TTGCTGCTCA ATGGCATGTT AGGTTTTTTA
CTCTTTGCCG GCGCATTGCA GATCCGTTTA AAAATACTGA GGCATCAGAA GTGGGAGATT
TTAATCCTCG CCTTTGTCAG CACTTTATTA TCGACCTTTA TCATAGGAGG ACTGTTATTT
TGGGTCGCGC CTATGTTGGG TCTACCGCTA CAACTCAGCC ACTGTTTACT GTTTGGCGCC
TTGATTTCGC CAACCGACCC CATCGCCGTT TTGGCTATTT TAAAGAAAAT GGGTGCACCG
GAAGATATTG CTATCCAAGT GGAAGGTGAA TCTTTATTTA ACGATGGCAT AGGGTTAGTG
ATTTTTGTGG CGATATCGCA ATTAGCCTTC TCCACTGAAC CGCTGACGTT TATCCATATC
TCTGAGTTAT TTATTCGTGA GGCGGTAGGT GGGGTCATTT ATGGTGGCGT GCTTGGTTTT
CTGCTGCATC ATTTTTTCCG CTATTGCGAG GAGGAAACGC AATTGATGCT GGTTACACTG
CTGATCCCAA CCGCGGGCTA TGTGATGGCG GAAGTGTTTG GGGTTTCTGG GCCTTTAGCT
ATGGTGAGTG CAGGTATCAT CATAGGTAAT TTCAGTGTGC CTAAGTTTTT TGCCCGCCAC
GAGCGAGTGA AACTACTGAC ATTTTGGTCG CTGATTGAAT CTTTCTTCAA TGCATTACTC
TTCCTACTGC TCGGCTTACT GCTTTTGTTA GTCACTTTTA AAGCGCCGTT GTGGTGGTTT
ATGTTTGTGG CGATTCCATT GGTATTATTG GCGCGTGCCG TGAGCGTGTT ATTACCTTAT
TTGGGCTTTA GGTTGTTTAA GTCTTACAAC CCCTATGCAG AGACGATTCT GATTTGGGGT
GGTTTAAGGG GAGGATTAGC ACTCGCGATG GCGATGAGTT TACCTGAGGG GATTGTCATC
GATGCTATTG GTGGTGTGGA GCTGCGGGAG TTGTTGTTAG TGATGACCTA TGCCGTCGTC
GTATTTTCGA TTCTAGTGCA GGGCTCTACT ATGACAGGGC TTATCCGCAG GAGTAATGCG
GTTACCGAAC CATCGAGGGC TGTTGGCTCT TCTGAAAATG CATAA
 
Protein sequence
MSSYQILCIL CALALVTSVV SSRVHKLQET VAITAIALGM SLLLLLGGKA LGGHVYLYFV 
SGLEKLDFQA LLLNGMLGFL LFAGALQIRL KILRHQKWEI LILAFVSTLL STFIIGGLLF
WVAPMLGLPL QLSHCLLFGA LISPTDPIAV LAILKKMGAP EDIAIQVEGE SLFNDGIGLV
IFVAISQLAF STEPLTFIHI SELFIREAVG GVIYGGVLGF LLHHFFRYCE EETQLMLVTL
LIPTAGYVMA EVFGVSGPLA MVSAGIIIGN FSVPKFFARH ERVKLLTFWS LIESFFNALL
FLLLGLLLLL VTFKAPLWWF MFVAIPLVLL ARAVSVLLPY LGFRLFKSYN PYAETILIWG
GLRGGLALAM AMSLPEGIVI DAIGGVELRE LLLVMTYAVV VFSILVQGST MTGLIRRSNA
VTEPSRAVGS SENA