Gene Shew185_1246 details

Gene Information

• Locus tag: Shew185_1246
• Symbol: era
• ID: 5369935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1486833
• End bp: 1487849
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640829445
• Product: GTP-binding protein Era
• Protein accession: YP_001365460
• Protein GI: 152999779
• COG category: [R] General function prediction only
• COG ID: [COG1159] GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00436] GTP-binding protein Era

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00162731
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAA AAACAGACTT GTCAGATATC GATGCTGCAA AAGCGGCAAC TGAGCCGAGT 
TTAGATGAAT TACTGGCAAG GATGAATGCG GCCGCGCCAA CGCCGTCGGC CCATTACGAT 
GTCACTTATT GCGGCATGGT GGCGATCATT GGTCGCCCTA ACGTCGGTAA ATCGACGTTA 
ATCAACCGTT TGCTTGGTCA GAAGGTGAGT ATTACTTCTA AAAAGCCGCA AACGACGCGC 
CACCGTATTA TGGGTATTCA TACCGATGGT CCTAAGCAAA TCGTGTTTAT CGATACACCG 
GGTTTGCACA TTGAAGAGCA GCGGGCGATT AACCGCCTGA TGAACCGCGC AGCGGCCAGT 
TCGCTTGCCG ATGTGGCTAT GGTCATTTTC GTGGTCGATG GCATGACGTG GACCGCTGAT 
GATGAGATGG TGCTGAGCAA ATTACGCCGT GGCGGCGAAG AGCGTCAGAC GATTCTGGCG 
ATCAACAAAG TCGACAATAT CAAAGACAAA GAATCACTAT TCCCGTATTT GGAAGAAGTC 
GCCAAAAAAT ATCCTTTCGA TGAAATTTTG CCAATTTCAG CCAGCAAGGG TACTAACGTC 
CAGCGAATTT TAGAGCTGGC AGCGGCATCG ATTCCTGAGG GACCTTTCTT CTTCCCTGAA 
GATTATGTTA CCGATCGTTC GCAACGTTTT ATGGCGTCGG AAATTGTGCG TGAAAAACTG 
ATGCGCTTCC TAGGTGATGA ATTACCCTAT GATGCGACGG TTGAGATCGA ACAGTTTAAG 
ATGATGGAAA ATGGCGTTTA TCAAATCAAT GCCCTGATCC TCGTTGAGCG TGAAGGACAG 
AAACGTATGG TGATCGGTAG CAAGGGCGAA CGTATTCGTA CTATTGCGAC TCAAGCCCGC 
TTAGACATGG AAACCTTGTT TGATAATAAA GTCTTCCTCG AAGTGTGGGT GAAAGTGAAA 
TCTGGTTGGG CCGATGATGA ACGCGCCCTG CGTAGCTTAG GTTACGGCGA CGATTAA 

 

Protein sequence

MTKKTDLSDI DAAKAATEPS LDELLARMNA AAPTPSAHYD VTYCGMVAII GRPNVGKSTL 
INRLLGQKVS ITSKKPQTTR HRIMGIHTDG PKQIVFIDTP GLHIEEQRAI NRLMNRAAAS 
SLADVAMVIF VVDGMTWTAD DEMVLSKLRR GGEERQTILA INKVDNIKDK ESLFPYLEEV 
AKKYPFDEIL PISASKGTNV QRILELAAAS IPEGPFFFPE DYVTDRSQRF MASEIVREKL 
MRFLGDELPY DATVEIEQFK MMENGVYQIN ALILVEREGQ KRMVIGSKGE RIRTIATQAR 
LDMETLFDNK VFLEVWVKVK SGWADDERAL RSLGYGDD