| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1235 |
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| Symbol | nhaR |
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| ID | 5371464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1476869 |
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| End bp | 1477804 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829434 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_001365449 |
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| Protein GI | 152999768 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGACG ATTCACACTG GATGAGCATG CTGCACTTGA ATTACAACCA CCTGTATTAT
TTTTGGATGA TTAAGAAAAA GGGCTCGGTT GCTAAGGCGG CCGAAGCCCT CTGTTTAACG
CCGCAAACGA TAACTGGGCA AATTCGTGCC CTAGAAGACA GGTTGAATGG CAGTTTATTC
AAGCGAGTAG GGCGGACACT GGAAGCCACT GAGTTAGGTG AGTTGGTATT TCGCTACGCA
GATAAGATGT TTAGTCTTAG CTACGAAATG CTCGATTTAC TTAACTATCA AAAAGATGAT
GCGATGCTTT TCGAAGTGGG TATAGCCGAT GCTTTGTCTA AAGCCTTAGT TAGCCGTGTC
TTGTTATCCG TCGTCCCCAA TGACAGTTCT ATGCATTTAG CTTGCTATGA GGCGACCCAC
GAAAGCCTGA TGGCGCGTTT GCGTGAGCAT AAACTGGATA TGATCCTCTC CGATTGTGCT
GGTGAATCAC TGAAGTATCC CGAAATCTTA TCTAAAAAGT TGGGCGAGTG TGGTGTGAGT
TTTTTCTCCG CAGATACTTA TAGCGCTGAT TTCCCCGCCT GTTTAGAGCA AGGCCAGCTA
TTAATCCCCG GCCGCAGAAC CTCACTTGGA CAGCAGTTAT ATCGCTGGTT TGACGAACAA
AATCTTAAAG TCAGTATCTT GGGTGAGTTC GACGATGCGG CCATGATGAA GGCCTTTGGT
TACCTTAAAC GGGGGATTTT TGTCACGCCG TCGATTTATC GCCAAGAAGT GATTTCCCAT
GGGATGAATT TGCTCGGTGA AACCACGGAT GTGAAAGAGG AATACCATGT GATGTTTGCC
GAACGTATGA TCCAACATCC TGCGGTAAAG CGCTTGTTGG ACACAGATTT CAGCGATCTC
TTTGCGGGAC GCGATATGCA AGTCCAACAA TGCTAA
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| Protein sequence | MRDDSHWMSM LHLNYNHLYY FWMIKKKGSV AKAAEALCLT PQTITGQIRA LEDRLNGSLF
KRVGRTLEAT ELGELVFRYA DKMFSLSYEM LDLLNYQKDD AMLFEVGIAD ALSKALVSRV
LLSVVPNDSS MHLACYEATH ESLMARLREH KLDMILSDCA GESLKYPEIL SKKLGECGVS
FFSADTYSAD FPACLEQGQL LIPGRRTSLG QQLYRWFDEQ NLKVSILGEF DDAAMMKAFG
YLKRGIFVTP SIYRQEVISH GMNLLGETTD VKEEYHVMFA ERMIQHPAVK RLLDTDFSDL
FAGRDMQVQQ C
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