Gene Shew185_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1233 
SymbolnhaA 
ID5370951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1475264 
End bp1476433 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content47% 
IMG OID640829432 
ProductpH-dependent sodium/proton antiporter 
Protein accessionYP_001365447 
Protein GI152999766 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CAATTAGAAA TTTTCTGAGC CAAGAATCGG CTGGCGGTAT CCTATTATTG 
GTTGCTGTTG CCTTAGCTAT GCTGATGGCT AATTCCCCTT TATCTGGACT TTATCAAGGC
TTTTTAGGCA CTGACGTACA AGTTAAAATT GGCGAGCTCG ATATTCATAA GCCGTTAATT
CTGTGGATCA ACGATGGCCT GATGGCCGTA TTCTTTTTGC TTATTGGTTT AGAAGTTAAA
CGTGAGTTAC TCGAAGGCGC CTTATCGAGT GTCGCTCAAG CCTCTCTGCC TACCTTTGCG
GCCATTGGCG GCATGTTAGT CCCTGCTGGG GTGTACTTGC TGTTTAACTA TGGCGATCCG
GTCACACAAG CGGGCTGGGC GATTCCTGCC GCGACGGATA TTGCGTTTGC TTTAGGTATT
ATGGCGCTGC TTGGGAGCCG AGTTCCCGTT TCACTGAAAG TCTTCTTACT TGCTTTAGCG
ATTATCGATG ACTTAGGCGT CATAGTGATT ATCGCGCTGT TCTACAGCAC CGACCTATCA
ACCATCAGTT TAGTGATTGC CAGTTTAGCG ATTGCGGGCT TGGTTGGGTT AAACCGCAAA
GGGGTCACCT CACTTTTGCC CTATGGCATT TTAGGATTAA TCCTTTGGGT CGCCGTACTT
AAGTCTGGAG TGCATGCGAC TCTGGCTGGT GTCATCATCG CTTTCTGTAT TCCATTACGG
GCAAAGGATG GCAGCTCACC TTCAGAAGGC TTAGAGCACA GTTTGCACCC TTGGAGCACC
TTCTTCATTC TGCCAGTGTT CGCTTTCGCC AATGCGGGTG TTTATGTCGG CAATATGAAT
TTGGAGACGT TAATTTCTCC GGTACCTGTC GGTATTGCAC TGGGCCTGAT GTTAGGTAAA
CCCATTGGTG TGATGGTGTT TAGCTATATT GCGGTGAAAC TTAAACTCGC TCAGTTACCC
GATGGCGTAG GTTGGAAGCA AATTGCCCCA GTCGCGGCCA TGTGCGGTAT TGGTTTTACT
ATGTCTATGT TTATTGCGTC GTTAGCCTTT GAACATGCAG ACCCTATGTA CGGTGACTTA
GCACGCCTAG GAACCTTAAT CGGTTCGATT ATGGCGGCGC TAGTCGGGTA TTTCTGGTTA
TCAAAAGTGT TACCTAATAA AGGAGTATAA
 
Protein sequence
MEKAIRNFLS QESAGGILLL VAVALAMLMA NSPLSGLYQG FLGTDVQVKI GELDIHKPLI 
LWINDGLMAV FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG VYLLFNYGDP
VTQAGWAIPA ATDIAFALGI MALLGSRVPV SLKVFLLALA IIDDLGVIVI IALFYSTDLS
TISLVIASLA IAGLVGLNRK GVTSLLPYGI LGLILWVAVL KSGVHATLAG VIIAFCIPLR
AKDGSSPSEG LEHSLHPWST FFILPVFAFA NAGVYVGNMN LETLISPVPV GIALGLMLGK
PIGVMVFSYI AVKLKLAQLP DGVGWKQIAP VAAMCGIGFT MSMFIASLAF EHADPMYGDL
ARLGTLIGSI MAALVGYFWL SKVLPNKGV