Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1233 |
Symbol | nhaA |
ID | 5370951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1475264 |
End bp | 1476433 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829432 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_001365447 |
Protein GI | 152999766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CAATTAGAAA TTTTCTGAGC CAAGAATCGG CTGGCGGTAT CCTATTATTG GTTGCTGTTG CCTTAGCTAT GCTGATGGCT AATTCCCCTT TATCTGGACT TTATCAAGGC TTTTTAGGCA CTGACGTACA AGTTAAAATT GGCGAGCTCG ATATTCATAA GCCGTTAATT CTGTGGATCA ACGATGGCCT GATGGCCGTA TTCTTTTTGC TTATTGGTTT AGAAGTTAAA CGTGAGTTAC TCGAAGGCGC CTTATCGAGT GTCGCTCAAG CCTCTCTGCC TACCTTTGCG GCCATTGGCG GCATGTTAGT CCCTGCTGGG GTGTACTTGC TGTTTAACTA TGGCGATCCG GTCACACAAG CGGGCTGGGC GATTCCTGCC GCGACGGATA TTGCGTTTGC TTTAGGTATT ATGGCGCTGC TTGGGAGCCG AGTTCCCGTT TCACTGAAAG TCTTCTTACT TGCTTTAGCG ATTATCGATG ACTTAGGCGT CATAGTGATT ATCGCGCTGT TCTACAGCAC CGACCTATCA ACCATCAGTT TAGTGATTGC CAGTTTAGCG ATTGCGGGCT TGGTTGGGTT AAACCGCAAA GGGGTCACCT CACTTTTGCC CTATGGCATT TTAGGATTAA TCCTTTGGGT CGCCGTACTT AAGTCTGGAG TGCATGCGAC TCTGGCTGGT GTCATCATCG CTTTCTGTAT TCCATTACGG GCAAAGGATG GCAGCTCACC TTCAGAAGGC TTAGAGCACA GTTTGCACCC TTGGAGCACC TTCTTCATTC TGCCAGTGTT CGCTTTCGCC AATGCGGGTG TTTATGTCGG CAATATGAAT TTGGAGACGT TAATTTCTCC GGTACCTGTC GGTATTGCAC TGGGCCTGAT GTTAGGTAAA CCCATTGGTG TGATGGTGTT TAGCTATATT GCGGTGAAAC TTAAACTCGC TCAGTTACCC GATGGCGTAG GTTGGAAGCA AATTGCCCCA GTCGCGGCCA TGTGCGGTAT TGGTTTTACT ATGTCTATGT TTATTGCGTC GTTAGCCTTT GAACATGCAG ACCCTATGTA CGGTGACTTA GCACGCCTAG GAACCTTAAT CGGTTCGATT ATGGCGGCGC TAGTCGGGTA TTTCTGGTTA TCAAAAGTGT TACCTAATAA AGGAGTATAA
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Protein sequence | MEKAIRNFLS QESAGGILLL VAVALAMLMA NSPLSGLYQG FLGTDVQVKI GELDIHKPLI LWINDGLMAV FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG VYLLFNYGDP VTQAGWAIPA ATDIAFALGI MALLGSRVPV SLKVFLLALA IIDDLGVIVI IALFYSTDLS TISLVIASLA IAGLVGLNRK GVTSLLPYGI LGLILWVAVL KSGVHATLAG VIIAFCIPLR AKDGSSPSEG LEHSLHPWST FFILPVFAFA NAGVYVGNMN LETLISPVPV GIALGLMLGK PIGVMVFSYI AVKLKLAQLP DGVGWKQIAP VAAMCGIGFT MSMFIASLAF EHADPMYGDL ARLGTLIGSI MAALVGYFWL SKVLPNKGV
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