| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1230 |
|---|
| Symbol | |
|---|
| ID | 5373715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1472703 |
|---|
| End bp | 1473503 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365444 |
|---|
| Protein GI | 152999763 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.615784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAGTT TGTTGTCGGT GTTTTTTATT TGCTTAGCTT TAGGCGCATT TGTCGGCTTT
ATGGCAGGGT TATTAGGTAT CGGTGGCGGC TTAATTGTAG TGCCTGCACT GCTCTATATT
CTGCCCTCGG TCGGTATTAG TTCTGCTCAG TTACCCCATA TTGCGATTGC CACTTCGCTG
GCGGCCATTA TTCTCACTTC TATCTCATCG ACACGAGCGC ACCATAAGCG TGGAAATATT
CCTTGGGATT TATTTAAGAC GATGTTGCCT GGGATTATTC TTGGGGCATT AACCTCAGGT
TTTATTGCCG AACGTATTTC TGCCGCAGCT TTGCAGCAGG GCTTTGCGAT ATTTGTGGTG
TTGATGTCAA TTCAGATGGC GTATCCCTTT AAAGCTGAAT CGAATCGTGA GCTACCCAGC
GCGCCGATAT TATTTGTTGT GGCGGCGTTA GTTGCGATGA TCGCAGGACT GATGGGCATC
GGCGGCGGGG TATTGTTAGT GCCGTTTTTA ACCTTCTTTG GCTTGCAGAT GCGTTACGCT
GTTGGGTTTT CGGCGGCGAC GGGTTTGTTG ATCTCCCTAT CGGGCAGTTT AGGCTATATC
ATCGCGGGCT TTAATGCGCC CGAGTTGCCC TACGGCACCT TAGGTTTTAT CTATTTACCC
GCCTTGTTTG GTTTAGTGAT CACTTCTGTC TTGATGGCGC CTGTGGGCGT AAAAGCAGCG
AGCACTTGGC CAACATCGGT ACTTAAAAAG ATATTTGCAC TGTTACTTCT GTTTGTCGGC
CTTAAGTTAA TTCTGACCTA G
|
|---|
| Protein sequence | MDSLLSVFFI CLALGAFVGF MAGLLGIGGG LIVVPALLYI LPSVGISSAQ LPHIAIATSL
AAIILTSISS TRAHHKRGNI PWDLFKTMLP GIILGALTSG FIAERISAAA LQQGFAIFVV
LMSIQMAYPF KAESNRELPS APILFVVAAL VAMIAGLMGI GGGVLLVPFL TFFGLQMRYA
VGFSAATGLL ISLSGSLGYI IAGFNAPELP YGTLGFIYLP ALFGLVITSV LMAPVGVKAA
STWPTSVLKK IFALLLLFVG LKLILT
|
|---|
| |