Gene Shew185_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1228 
Symbol 
ID5370607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1469861 
End bp1470385 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID640829427 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_001365442 
Protein GI152999761 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000133704 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGATA GCGACGGCTT TCGCGCAAAT GTGGGCATTA TAATTTGTAA CAGATATGGC 
CAAGTCATGT GGGCCAGACG CTTCGGTCAA CACTCATGGC AATTTCCTCA AGGTGGTGTC
GATGATGGCG AGACAGCAGA AGAGGCAATG TACCGTGAGC TATATGAAGA AGTGGGCCTA
AGACCCGAAC ACGTGCATAT CCTAACCTCG ACCCGTTCTT GGTTACGCTA TCGTTTGCCA
AAGCGTTTAG TCAGGCAAGA CAGTAAACCT GTGTGTATAG GGCAAAAACA AAAGTGGTTT
CTGTTACAAC TGAAAAGCCA AGATAGTGCG ATTAATTTGA GTTCCTCTGG GCATCCTGAA
TTTGACGATT GGCGCTGGGT AAGTTATTGG TATCCTGTGC GGCAAGTCGT GTCATTTAAG
CGTGATGTTT ATCGTAAGGT GATGAAAGAG TTTGCGGTAA CGGCATTGTC ATTCCAGACC
CTAGAAATAC CTAGGAAACG GGGAAGACAA AAAACAACGG GCTGA
 
Protein sequence
MIDSDGFRAN VGIIICNRYG QVMWARRFGQ HSWQFPQGGV DDGETAEEAM YRELYEEVGL 
RPEHVHILTS TRSWLRYRLP KRLVRQDSKP VCIGQKQKWF LLQLKSQDSA INLSSSGHPE
FDDWRWVSYW YPVRQVVSFK RDVYRKVMKE FAVTALSFQT LEIPRKRGRQ KTTG