| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1225 |
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| Symbol | |
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| ID | 5370861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1466311 |
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| End bp | 1467237 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829424 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001365439 |
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| Protein GI | 152999758 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00128193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCG AGAAAATGAA AAGTTTACCT AGCTTAAAAA ACTTATTCTA TTTGGTGAAT
CTCCATCAAG AGCAGAATTT TAACCGCGCG GCTAAGGTGT GTTTTGTCAG CCAATCGACG
CTTTCGAGTG GGATCCAAAA CTTAGAAGAG CAGTTAGGGC ATCAGTTGAT TGAGCGAGAC
CATAAGTCGT TTATGTTTAC CGCTATTGGT GAAGAAGTGG TGCAGCGCGC CCGTAAAATT
CTCACCGATG TGGATGATTT GGTAGAATTG GTGAAAAACC AAGGCGAGCC GATGACAGGC
GATATACGTT TAGGGTGTAT ACCTACGATT GCGCCTTTCC TATTGAGCCG TGTTATTCGT
CAATGCCAGC AATCTTATCC TGCGATGAGT TTATTACTGA AAGAAGATAC CACTGAGCGT
TTGCTGGATG CCTTAGGTAA GGGTGAGCTG GATTTATTGA TCCTTGCTTT GCCTGTGGAT
ACCAGCGGTT ATCACAGTAT GAAAGTGGGT AAAGATCCAT TCAAAATGGT GATCCATAAG
GATTTAGCCG GAGAAATCCA TCAGCCGATC GATTACCAAG CCTTGCCAGA CGAGAGTATT
TTCCTGCTGC AAAGCGAGCA TTGCATTACA GGGCATGCCA TCACAGCCTG TCAGCTTGGG
GATAGCGCGA AAGTGAATCC GTTTGCCGCC ACCAGTTTGC ATACCTTAGT GCAGATGGTG
AACAGTAAGC TGGGCACCAC ATTCCTGCCG CAAATGGCAA TCGATGCGGG TATTTTGAAT
GACACTGATT TGGTGGTGAT GACGCCGCCG GGTGAAGCGC CTTACCGTGA TATCGGCCTT
GTCTGGCGTC AAACGACCAG CCGGATCTTA ACCTTCCGTA CCTTAGGTTT AATGATCCAA
AAGTTATTAA CCAAAGAAGC ACAATAA
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| Protein sequence | MAIEKMKSLP SLKNLFYLVN LHQEQNFNRA AKVCFVSQST LSSGIQNLEE QLGHQLIERD
HKSFMFTAIG EEVVQRARKI LTDVDDLVEL VKNQGEPMTG DIRLGCIPTI APFLLSRVIR
QCQQSYPAMS LLLKEDTTER LLDALGKGEL DLLILALPVD TSGYHSMKVG KDPFKMVIHK
DLAGEIHQPI DYQALPDESI FLLQSEHCIT GHAITACQLG DSAKVNPFAA TSLHTLVQMV
NSKLGTTFLP QMAIDAGILN DTDLVVMTPP GEAPYRDIGL VWRQTTSRIL TFRTLGLMIQ
KLLTKEAQ
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