| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1221 |
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| Symbol | gltD |
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| ID | 5369531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1458078 |
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| End bp | 1459484 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640829420 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001365435 |
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| Protein GI | 152999754 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCCACCAA ACACCCTGCA
GCTAAACGTG CGACTCAGTT TATTGAGATT TATCAGCCTT TTGCTCAGCC TGAAGTGGCA
CAGCAAGCGG ATCGCTGTTT AGATTGCGGC AATCCTTATT GTGAGTGGAA ATGTCCGCTA
CACAATTATA TTCCTAACTG GCTCAAGCTA GCGGAGCAAG GTCGCATCAT GGAAGCGGCG
GATTTAGTGC ATGAGACCAA CACTCTGCCC GAAATCTGCG GCCGTGTTTG TCCACAGGAC
AGACTCTGTG AAGGCGCTTG TACCCTTAAC GACGACTTTG GCGCTGTCAC TATCGGTAAT
GTCGAAAAAT ACATTACCGA CACAGCCATC GCCCAAGGCT GGCGCCCCGA TATGAGCAAG
GTCACGCCAC GCCCTGAACG AGTGGCAATT GTCGGTGCGG GTCCTGCGGG TTTAGGCTGC
GCGGATATTC TGTCTCGTAA CGGTGTTAAA GCTGTGGTCT TTGATAAATA TCCACAAATT
GGTGGCCTGC TCACCTACGG TATTCCGTCT TTTAAGCTCG ACAAGGCCGT CATGGCGACC
CGTCGCAGTG TATTAGAAGG CATGGGTATT GAGTTCAAAC TCGGGGTTAC TGTCGGTAAA
GACATCCCAT TTACTAAACT GCTCGAAGAA TACGATGCAG TATTCCTTGG TATGGGCACC
TATACCGCGA TGAAAGCGGG CCTTGAGGGT GAAGATGCCC AAGGCGTATA CCAAGCCCTG
CCCTATTTGA TTGGTAATAC CCACCATTTA ATGGGCACTC AAGATGCGCA AACGCCCTAC
CTGAACCTTG AAGGTAAACG TGTGGTGGTG TTAGGCGGTG GTGATACTGC GATGGATTGC
GTGCGCACAG CCGTCAGACA AGGTGCCAGC AGCGTAGTCT GTGCTTACCG CCGAGACGAG
GCCAACATGC CGGGTTCACG CCGCGAAGTG CAAAATGCAC GGGAGGAAGG GGTTGATTTC
CTGTTTAACC GTCAACCTGT GGCGATTAAA ACCCAAGATG GCAAAGTAGT CGGCATTGAA
TGCGTCGAAA CCGCCATGGG TAAAGCCGAT GCCAGTGGTC GTCAACGCGC CGAAGCTATT
GCGGGTAGCG AACAGTTGCT CGAAGCCGAT GCGATTATTA TTGCTTTCGG TTTCCAACCT
AGCCCAGCAC CTTGGTTTGC CGACCATGGC ATCGAGCTCG ATCAATGGGG CCGAGTTAAA
GCGAGTAAGT TAGACGGAAA TCCTTTCCAA ACCACCAACC CAAAAGTGTT TGCTGGTGGT
GATATGGTGC GCGGTTCTGA CTTAGTCGTG ACAGCCATTG CCGAAGGTCG CGATGCTGCT
CAAGGTATTC TTAACTACTT AGACTAA
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| Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRATQFIEI YQPFAQPEVA QQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AEQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN DDFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRPERVAI VGAGPAGLGC ADILSRNGVK AVVFDKYPQI
GGLLTYGIPS FKLDKAVMAT RRSVLEGMGI EFKLGVTVGK DIPFTKLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGTQDAQTPY LNLEGKRVVV LGGGDTAMDC
VRTAVRQGAS SVVCAYRRDE ANMPGSRREV QNAREEGVDF LFNRQPVAIK TQDGKVVGIE
CVETAMGKAD ASGRQRAEAI AGSEQLLEAD AIIIAFGFQP SPAPWFADHG IELDQWGRVK
ASKLDGNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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