| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1211 |
|---|
| Symbol | |
|---|
| ID | 5369763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1448827 |
|---|
| End bp | 1449522 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640829410 |
|---|
| Product | aquaporin Z |
|---|
| Protein accession | YP_001365425 |
|---|
| Protein GI | 152999744 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGT CACAAAAAAT GGCGGCGGAA TTTCTTGGCA CCTTGTGGTT AGTCCTTGGA
GGCTGTGGCA GTGCGGTAAT TGCCGCTGCA TTTCCCGAGG TGGGCATTGG CCTACTCGGT
GTCGCGTTCG CATTTGGCTT AACGGTTCTC ACTATGGCCT TTGCGATTGG CCATATTTCA
GGTTGTCACC TTAACCCAGC GGTGTCATTC GGCCTTTGGG CTGGCGGACG TTTTCCAGCG
GCAGAATTAT TGCCCTACAT CATAGCCCAA GTCGCGGGCG GGATTGCAGG GGCGGGTATC
TTGTATCTTA TTGCTTCTGG GCAGGAAGGA TTTTCACTCG CGGGCGGATT TGCCTCTAAC
GGTTTTGGTG AGCACTCCCC TGGCGGTTAC AGCATGCTGT CGGTCATGAT TTGCGAAGTT
GTTATGACAC TGTTCTTCTT AATCATTATT TTAGGTGCCA CCGATGAACG CGCGCCCAAA
GGGTTTGCCC CGATTGCGAT AGGTCTAGGC TTAACCTTGA TCCACCTTAT CAGTATTCCA
GTGTCCAATA CTTCGGTGAA TCCTGCGCGC AGTACAGGTC CTGCGTTGTT TGTCGGTGAC
TGGGCGGTAT CGCAGCTCTG GTTATTCTGG GTAGCACCGA TTGTCGGCGC CATTTTGGCA
GGCTTTATCT ATCGCTACTT CCGCGCGGCA GAATAA
|
|---|
| Protein sequence | MNMSQKMAAE FLGTLWLVLG GCGSAVIAAA FPEVGIGLLG VAFAFGLTVL TMAFAIGHIS
GCHLNPAVSF GLWAGGRFPA AELLPYIIAQ VAGGIAGAGI LYLIASGQEG FSLAGGFASN
GFGEHSPGGY SMLSVMICEV VMTLFFLIII LGATDERAPK GFAPIAIGLG LTLIHLISIP
VSNTSVNPAR STGPALFVGD WAVSQLWLFW VAPIVGAILA GFIYRYFRAA E
|
|---|
| |