Gene Shew185_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1206 
Symbol 
ID5371754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1444733 
End bp1446457 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content49% 
IMG OID640829405 
Productchloride channel core 
Protein accessionYP_001365420 
Protein GI152999739 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATTAA CGATAAATAA AGTCGCTATT CAACATGCCA TAGTCACAGC CAAAAAGTAT 
TTAACCAATG AGCTACGTGA CCATTTATCC CAAGCGAGGA TCAGTGCGCA ACTGTGCATA
CTGGCACTGC TGTTTGCCAT TTTCGCATCC TGCGTGATCT TACTGTTTCG ACTCTTGCTC
GTTTGGGCCA ATCATTACAC CCAAATACAG GCGCTGGATT TTACGGGGAA CGTCGCCGAC
TGGCGAGCCC TGTTACCACT TTTAGGCGCA ATATTAATTT GGATTGTGGC TAAGCTAGGC
TCCAAACGTT ATAAGCGTAT GGGAATAGCC TATGTGTTAC ATAGAGTTAA ACTGCACTAC
GGTAAAATTC CGCTACAATC TGCCGTAGGG CAATTTTTTC AAGCACTATT CGCCCTCGGC
ACCAATTTCT CCGTCGGCCG TGAAGGTCCT GCTATTCATC TGGGCGCTGT CAGTGCCAGT
TTTCTCGCCG AAAAATTCAA TCTTCCCGAT AACAGTGTGC GCATTATGTG CGCCAGTGGC
ATTGCCGCAG GGATTGCCGC GACCTTTAAC GCGCCCTTGG CGGCAGTGAT TTTTGTTCTC
GAAGTGATTG TCCGCGAATA TAAAGTCCAT TACTTCTTCC CGATTATGCT CTCCGCGATT
TGTGGCGCGG TTTCAAGCCA ATTAGTGTTT GGTAATGTGC ACGAATTTGA CCGTATTCAA
GTGATCCACA TTCCCTTAGA TCACTACCCT ATTCTCGCCA TCGGCGGCGT AGTATTGGGC
TGCGCTGCGG CGCTGTTTAA TTACTCACTC TTAAAAGTCA CCGCGACGGG GCAAAACTGG
CCACTCATCT ACCGACTATT ATTGGCGGGC AGCGTCACCA CACTAATCGG TCTAGTATTA
CCGCAAGCCC TTGGTACGGG CGATCTCGCC ATTAGCGAAG CCATTAGTCA ACATCCAAGC
CTGTTGCTGT TAATCGCCCT GTTATTTGCC AAAATCATTG CCACTATTGC AGCGATTGGC
TTAGGTATTC CAGGTGGTTT GATTGGTCCA CTCTATGGTA TCGGCGCGCT GCTCGGCGCG
ATTTTGGCGC TGATCAGTGC CATCTTATTC CCGTCGATCG CTCCATATGT AGGGCTTTAC
ACTGTGATCG GCATGACAGC CATGATGGGC GTGTGCTTAA GCGCGCCGCT GGCGGCGTTA
GTCGCCCTGC TAGAAATGAC CAATGATGCC AGTATTATTC TGCCAGCGAT GTTTGTGACT
ATTCCGGCAT TTTTGATTGC CTATCAAGGT TTTAAGACTA ACTCTATTTT CTTTAAACAA
TTAGAAATCA TGGGGCTAGG CTATAAAGTT GCGCCAGTAA ATTTAGCGCT GCAGAAAAAA
GGCGTGCGAG CCTTGATGGA TAAACGCTTT GTTATCGTCA ATAACAACGA TGAATTGTTA
CTCGAAGTGC TTAAACGGGC AGAAGGTCGA CCTGTGCTGG TTCGCAATGC CGATGGCGTT
ATCGAAATGC TCAGCCTTGA AATGCAATCC TACGATGACA GTACCACGCT ATCGCGCCAT
CCCATGCAAG GCTTAAGCGA CAGCACCACG CTCAATGAGG CCTATTTACT CTTGTCACCC
AAGCGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCCG ATAACGTGGT CGGAGTGATC
AGTTGGTCGA ACCTGCAACA AGAAATTCGC TTAGGCCAAG CCTAG
 
Protein sequence
MQLTINKVAI QHAIVTAKKY LTNELRDHLS QARISAQLCI LALLFAIFAS CVILLFRLLL 
VWANHYTQIQ ALDFTGNVAD WRALLPLLGA ILIWIVAKLG SKRYKRMGIA YVLHRVKLHY
GKIPLQSAVG QFFQALFALG TNFSVGREGP AIHLGAVSAS FLAEKFNLPD NSVRIMCASG
IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ
VIHIPLDHYP ILAIGGVVLG CAAALFNYSL LKVTATGQNW PLIYRLLLAG SVTTLIGLVL
PQALGTGDLA ISEAISQHPS LLLLIALLFA KIIATIAAIG LGIPGGLIGP LYGIGALLGA
ILALISAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT
IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL
LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDSTTLSRH PMQGLSDSTT LNEAYLLLSP
KRSGEVFIYQ DTPDNVVGVI SWSNLQQEIR LGQA