Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1206 |
Symbol | |
ID | 5371754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1444733 |
End bp | 1446457 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829405 |
Product | chloride channel core |
Protein accession | YP_001365420 |
Protein GI | 152999739 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATTAA CGATAAATAA AGTCGCTATT CAACATGCCA TAGTCACAGC CAAAAAGTAT TTAACCAATG AGCTACGTGA CCATTTATCC CAAGCGAGGA TCAGTGCGCA ACTGTGCATA CTGGCACTGC TGTTTGCCAT TTTCGCATCC TGCGTGATCT TACTGTTTCG ACTCTTGCTC GTTTGGGCCA ATCATTACAC CCAAATACAG GCGCTGGATT TTACGGGGAA CGTCGCCGAC TGGCGAGCCC TGTTACCACT TTTAGGCGCA ATATTAATTT GGATTGTGGC TAAGCTAGGC TCCAAACGTT ATAAGCGTAT GGGAATAGCC TATGTGTTAC ATAGAGTTAA ACTGCACTAC GGTAAAATTC CGCTACAATC TGCCGTAGGG CAATTTTTTC AAGCACTATT CGCCCTCGGC ACCAATTTCT CCGTCGGCCG TGAAGGTCCT GCTATTCATC TGGGCGCTGT CAGTGCCAGT TTTCTCGCCG AAAAATTCAA TCTTCCCGAT AACAGTGTGC GCATTATGTG CGCCAGTGGC ATTGCCGCAG GGATTGCCGC GACCTTTAAC GCGCCCTTGG CGGCAGTGAT TTTTGTTCTC GAAGTGATTG TCCGCGAATA TAAAGTCCAT TACTTCTTCC CGATTATGCT CTCCGCGATT TGTGGCGCGG TTTCAAGCCA ATTAGTGTTT GGTAATGTGC ACGAATTTGA CCGTATTCAA GTGATCCACA TTCCCTTAGA TCACTACCCT ATTCTCGCCA TCGGCGGCGT AGTATTGGGC TGCGCTGCGG CGCTGTTTAA TTACTCACTC TTAAAAGTCA CCGCGACGGG GCAAAACTGG CCACTCATCT ACCGACTATT ATTGGCGGGC AGCGTCACCA CACTAATCGG TCTAGTATTA CCGCAAGCCC TTGGTACGGG CGATCTCGCC ATTAGCGAAG CCATTAGTCA ACATCCAAGC CTGTTGCTGT TAATCGCCCT GTTATTTGCC AAAATCATTG CCACTATTGC AGCGATTGGC TTAGGTATTC CAGGTGGTTT GATTGGTCCA CTCTATGGTA TCGGCGCGCT GCTCGGCGCG ATTTTGGCGC TGATCAGTGC CATCTTATTC CCGTCGATCG CTCCATATGT AGGGCTTTAC ACTGTGATCG GCATGACAGC CATGATGGGC GTGTGCTTAA GCGCGCCGCT GGCGGCGTTA GTCGCCCTGC TAGAAATGAC CAATGATGCC AGTATTATTC TGCCAGCGAT GTTTGTGACT ATTCCGGCAT TTTTGATTGC CTATCAAGGT TTTAAGACTA ACTCTATTTT CTTTAAACAA TTAGAAATCA TGGGGCTAGG CTATAAAGTT GCGCCAGTAA ATTTAGCGCT GCAGAAAAAA GGCGTGCGAG CCTTGATGGA TAAACGCTTT GTTATCGTCA ATAACAACGA TGAATTGTTA CTCGAAGTGC TTAAACGGGC AGAAGGTCGA CCTGTGCTGG TTCGCAATGC CGATGGCGTT ATCGAAATGC TCAGCCTTGA AATGCAATCC TACGATGACA GTACCACGCT ATCGCGCCAT CCCATGCAAG GCTTAAGCGA CAGCACCACG CTCAATGAGG CCTATTTACT CTTGTCACCC AAGCGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCCG ATAACGTGGT CGGAGTGATC AGTTGGTCGA ACCTGCAACA AGAAATTCGC TTAGGCCAAG CCTAG
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Protein sequence | MQLTINKVAI QHAIVTAKKY LTNELRDHLS QARISAQLCI LALLFAIFAS CVILLFRLLL VWANHYTQIQ ALDFTGNVAD WRALLPLLGA ILIWIVAKLG SKRYKRMGIA YVLHRVKLHY GKIPLQSAVG QFFQALFALG TNFSVGREGP AIHLGAVSAS FLAEKFNLPD NSVRIMCASG IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ VIHIPLDHYP ILAIGGVVLG CAAALFNYSL LKVTATGQNW PLIYRLLLAG SVTTLIGLVL PQALGTGDLA ISEAISQHPS LLLLIALLFA KIIATIAAIG LGIPGGLIGP LYGIGALLGA ILALISAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDSTTLSRH PMQGLSDSTT LNEAYLLLSP KRSGEVFIYQ DTPDNVVGVI SWSNLQQEIR LGQA
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