Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1202 |
Symbol | |
ID | 5372146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1440020 |
End bp | 1441267 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829401 |
Product | citrate transporter |
Protein accession | YP_001365416 |
Protein GI | 152999735 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.549096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATA CCTTTCTCAT CATACTGGCC GTGCTCGCAT TGCTCAGTAT TATTTTCGAA GAAGTGACCC ACCTTAATAA AGCAAAAACC ACCTTATTCT TTGGCTGTAT CTCTTGGGTA GCGCTGTTTA TGGCTGCTGG AGAACCGGCC AATGAGAAAC TCGTTGCCCA TCAACTCAAT GAAAATTTGC TCGAAATTGC CACACTCTGG CTCTTTCTGA TGTCGACCAT GACCTTCGTC GCGTACTTGA ACGCTAAAGG CATGATCCAA ATCATGGTGC AAAAGCTGTT CCCGCAGAAA GTATCGGTGC GCATGTTGAT GATCCAAGTT GCCCTGTTCG CACTCGTGCT CTCGGCATTT TGTGATAACG TCACCGCGAC GTTAGTGTCA TTAGGCTTAT TAACCACCTT TAAACTCGAC AAGCAAATGC GCCGCAGAAT GGCAGTGTTG ATTATCTTCG CAGTGAACTC AGGCGGTGTC GCTTTGATCA CCGGCGATGT GACAACATTG ATGATCTTCT TAGGCGGCCA TGTGCATATG TCCGAACTGC TGATGTTGTT TATCCCATCG GCCGTGAGCG TGATTTTGTT GGCAACCCTG TTCTCACTCA AAGCCGAAGG CGTGGTGAGC ACGACACCCA TCAAACACAC CTATCAAACC GTTGATGTCA TGATTGCCCT CGTGTTCTTC TGCACGATTT TAATGACCAT GTTACTGAAC ATATTGTTTG GTATCCCGCC AGTGCTGACC TTCCTAACGG GTCTGTCAAT CATGTTCCTG ATTGGCCATA CCACACGTAG CGATAAAGAA GAAATCAAAA TCCTTGAGTA TATTCGCCAA GTTGAATACG ACACCCTGTT GTTCTTCTTA GGTATTTTGC TGCTCGTGGG TATGCTTAAA GAAATCGGCA CCTTAGACAT GCTGACCGAA GCTTATACTA TGTTTAATCC AAACATCTCT AACTTCGTCA CAGGTATCGG CTCAGCCTTG ATTGATAACG TGCCATTAAC AGCGGCATTG TTAAAAGCAA GCCCTGTCCT GAATACTCCA GAATGGCTTG GCTTAACCTA TAGCGTTGGC GTAGGTGGCT CACTGCTGAT TATCGGTTCT GCATCGGGTA TTGTGGCCAT GAGTAAAGTG AAAGAACTGA CGTTTGTGAG TTATTTAAAA TACGTTCCAG CACTTTTCCT TTGCTACAGC GTCGGTTACG CACTGACCCT ATTCTTAGCC TACAGACTGT TTGATTAA
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Protein sequence | MLNTFLIILA VLALLSIIFE EVTHLNKAKT TLFFGCISWV ALFMAAGEPA NEKLVAHQLN ENLLEIATLW LFLMSTMTFV AYLNAKGMIQ IMVQKLFPQK VSVRMLMIQV ALFALVLSAF CDNVTATLVS LGLLTTFKLD KQMRRRMAVL IIFAVNSGGV ALITGDVTTL MIFLGGHVHM SELLMLFIPS AVSVILLATL FSLKAEGVVS TTPIKHTYQT VDVMIALVFF CTILMTMLLN ILFGIPPVLT FLTGLSIMFL IGHTTRSDKE EIKILEYIRQ VEYDTLLFFL GILLLVGMLK EIGTLDMLTE AYTMFNPNIS NFVTGIGSAL IDNVPLTAAL LKASPVLNTP EWLGLTYSVG VGGSLLIIGS ASGIVAMSKV KELTFVSYLK YVPALFLCYS VGYALTLFLA YRLFD
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