| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1200 |
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| Symbol | |
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| ID | 5373647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1437120 |
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| End bp | 1438793 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829399 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001365414 |
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| Protein GI | 152999733 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGG CCTTTTACGG ACTCAGCGAT AACCCTTTTT CGATTGCACC CAATCCCCAT
TATTTGTTTT TGAGTGATAG GCACAGAGAG GCGTTGGCCC ATTTAACCTA CGGGTTAGGG
GAAACGGGCG GCTTTGTGTT GCTAACAGGG GAAGTTGGCA CGGGTAAAAC GACGGTATCT
CGCTGTTTAC TTGGGCAATT GCCCGATAAT ACCGACACCG CATTTATCCT TAATCCATCG
CTAACAGAGC TCGAGTTGCT CGCCACGCTT TGCGATGAAC TTAAGATTTC CTACGGCGAC
AATCCCACAC TCAAGCAGTT GACCGACCAC TTGAGTCGTT TTTTATTGGA CAATCACAGC
AAAGGTCGTA ATACCGTGCT CATCATTGAT GAAGCGCAGC ATTTACGCCC TGAGGTATTG
GAGCAACTGC GCCTTCTGAC CAATCTTGAG ACGGACACCA AGAAGTTACT GCAGGTCATT
TTAATCGGTC AGCCAGAATT ACAGCTGTTA TTGAAGCGCC AAGAGCTGCG CCAGTTAGCC
CAGCGGATCA CCGCTCGTTA TCATTTATTG CCGCTAAATG AAGATGAAAT CGCCCTTTAT
GTATTGCATC GCTTGCAAGT CGCGGGACGA TTTGAACCTT TGTTTACCCG CAAAGCCGTT
AAGGTGTTGC AAAAGTACAG TGGCGGCATC CCTCGATTAA TTAACCTCTT ATGTGAACGT
TCGCTGATGG CGGGCTATGC GCAATCGCGG GTGCCCATCG ATCATCATAT GGTGAGACAA
GCTGCGGCTG AAGTATTAGG TGAAGAGGAG CCGACTCAGA ATAGGTATCT TTGGCCGACA
ACAACCGCTG CGACGTTATT TGTCGCTTTT GGTGTTTCCT ATTGGCTATT TACCGACAAG
CCTGTCAATG CCGCGTCAGC GTCTAGTAGG GTTATTGAGT CTGCGTCAGC AAATGTTGCT
GCATTAAACA CTCAAGCTTT GAGCGCGACC GAAGGAATGA GCAAGTTAGT ACAACCCGTA
GATCAGCAAA GCAATCAGGT GTCTATTCCA GATCCCAATC AGCGCTTACT TAATGATGCG
ATTAATCAGA GTCGCGATAT CGATACCGCC TTTGCGGGTT TGTTTAGCGT GTGGGGCAAA
GTACCCTATA AAGGCTTAAC CGCCTGCCAA TCTGCGGTTG AGCAAGGATT GTCTTGTTAT
CAGCAGCAGG GTAACTGGAT GTCACTGACT CGGCTTAATT ATCCAGCCGT GGTGTATTTG
GTTGATGATA ACCAACAGGA TTTTTATGGC GCTGTGATTG CAGTGGATGG TGAGCAGTTG
CTGATGCAGT TAGGTGAACA ACAACTGTGG GTTGATAGAG CTTGGTTCAA TCAACATTTC
AGTGGCACCT TCGAAATCCT ATGGCAAGCA CCTAATTTGC CTATGATGGA TATCAGTCAA
AAATCGAGTC CAGGTCAACT GCAATGGTTA GAGAATGCCT TAGCCCATGT GAATAATCGC
AATACTCGCA GGGTCAATCA ATTCGATGTG CAACTGGAAA ATGATCTTAA AAGCTTCCAA
AGTCAGCATG GCTTAAAAGC CGATGGTATT GCCGGAAATC AGACATTAGT GAGATTAAAT
TTGTATTTAA GTCAGCAAGG TCCACGTTTA ACCGATAATG GGGTGCGCAG CTGA
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| Protein sequence | MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS
RCLLGQLPDN TDTAFILNPS LTELELLATL CDELKISYGD NPTLKQLTDH LSRFLLDNHS
KGRNTVLIID EAQHLRPEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA
QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAV KVLQKYSGGI PRLINLLCER
SLMAGYAQSR VPIDHHMVRQ AAAEVLGEEE PTQNRYLWPT TTAATLFVAF GVSYWLFTDK
PVNAASASSR VIESASANVA ALNTQALSAT EGMSKLVQPV DQQSNQVSIP DPNQRLLNDA
INQSRDIDTA FAGLFSVWGK VPYKGLTACQ SAVEQGLSCY QQQGNWMSLT RLNYPAVVYL
VDDNQQDFYG AVIAVDGEQL LMQLGEQQLW VDRAWFNQHF SGTFEILWQA PNLPMMDISQ
KSSPGQLQWL ENALAHVNNR NTRRVNQFDV QLENDLKSFQ SQHGLKADGI AGNQTLVRLN
LYLSQQGPRL TDNGVRS
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