Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1200 |
Symbol | |
ID | 5373647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1437120 |
End bp | 1438793 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829399 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001365414 |
Protein GI | 152999733 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAGG CCTTTTACGG ACTCAGCGAT AACCCTTTTT CGATTGCACC CAATCCCCAT TATTTGTTTT TGAGTGATAG GCACAGAGAG GCGTTGGCCC ATTTAACCTA CGGGTTAGGG GAAACGGGCG GCTTTGTGTT GCTAACAGGG GAAGTTGGCA CGGGTAAAAC GACGGTATCT CGCTGTTTAC TTGGGCAATT GCCCGATAAT ACCGACACCG CATTTATCCT TAATCCATCG CTAACAGAGC TCGAGTTGCT CGCCACGCTT TGCGATGAAC TTAAGATTTC CTACGGCGAC AATCCCACAC TCAAGCAGTT GACCGACCAC TTGAGTCGTT TTTTATTGGA CAATCACAGC AAAGGTCGTA ATACCGTGCT CATCATTGAT GAAGCGCAGC ATTTACGCCC TGAGGTATTG GAGCAACTGC GCCTTCTGAC CAATCTTGAG ACGGACACCA AGAAGTTACT GCAGGTCATT TTAATCGGTC AGCCAGAATT ACAGCTGTTA TTGAAGCGCC AAGAGCTGCG CCAGTTAGCC CAGCGGATCA CCGCTCGTTA TCATTTATTG CCGCTAAATG AAGATGAAAT CGCCCTTTAT GTATTGCATC GCTTGCAAGT CGCGGGACGA TTTGAACCTT TGTTTACCCG CAAAGCCGTT AAGGTGTTGC AAAAGTACAG TGGCGGCATC CCTCGATTAA TTAACCTCTT ATGTGAACGT TCGCTGATGG CGGGCTATGC GCAATCGCGG GTGCCCATCG ATCATCATAT GGTGAGACAA GCTGCGGCTG AAGTATTAGG TGAAGAGGAG CCGACTCAGA ATAGGTATCT TTGGCCGACA ACAACCGCTG CGACGTTATT TGTCGCTTTT GGTGTTTCCT ATTGGCTATT TACCGACAAG CCTGTCAATG CCGCGTCAGC GTCTAGTAGG GTTATTGAGT CTGCGTCAGC AAATGTTGCT GCATTAAACA CTCAAGCTTT GAGCGCGACC GAAGGAATGA GCAAGTTAGT ACAACCCGTA GATCAGCAAA GCAATCAGGT GTCTATTCCA GATCCCAATC AGCGCTTACT TAATGATGCG ATTAATCAGA GTCGCGATAT CGATACCGCC TTTGCGGGTT TGTTTAGCGT GTGGGGCAAA GTACCCTATA AAGGCTTAAC CGCCTGCCAA TCTGCGGTTG AGCAAGGATT GTCTTGTTAT CAGCAGCAGG GTAACTGGAT GTCACTGACT CGGCTTAATT ATCCAGCCGT GGTGTATTTG GTTGATGATA ACCAACAGGA TTTTTATGGC GCTGTGATTG CAGTGGATGG TGAGCAGTTG CTGATGCAGT TAGGTGAACA ACAACTGTGG GTTGATAGAG CTTGGTTCAA TCAACATTTC AGTGGCACCT TCGAAATCCT ATGGCAAGCA CCTAATTTGC CTATGATGGA TATCAGTCAA AAATCGAGTC CAGGTCAACT GCAATGGTTA GAGAATGCCT TAGCCCATGT GAATAATCGC AATACTCGCA GGGTCAATCA ATTCGATGTG CAACTGGAAA ATGATCTTAA AAGCTTCCAA AGTCAGCATG GCTTAAAAGC CGATGGTATT GCCGGAAATC AGACATTAGT GAGATTAAAT TTGTATTTAA GTCAGCAAGG TCCACGTTTA ACCGATAATG GGGTGCGCAG CTGA
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Protein sequence | MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS RCLLGQLPDN TDTAFILNPS LTELELLATL CDELKISYGD NPTLKQLTDH LSRFLLDNHS KGRNTVLIID EAQHLRPEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAV KVLQKYSGGI PRLINLLCER SLMAGYAQSR VPIDHHMVRQ AAAEVLGEEE PTQNRYLWPT TTAATLFVAF GVSYWLFTDK PVNAASASSR VIESASANVA ALNTQALSAT EGMSKLVQPV DQQSNQVSIP DPNQRLLNDA INQSRDIDTA FAGLFSVWGK VPYKGLTACQ SAVEQGLSCY QQQGNWMSLT RLNYPAVVYL VDDNQQDFYG AVIAVDGEQL LMQLGEQQLW VDRAWFNQHF SGTFEILWQA PNLPMMDISQ KSSPGQLQWL ENALAHVNNR NTRRVNQFDV QLENDLKSFQ SQHGLKADGI AGNQTLVRLN LYLSQQGPRL TDNGVRS
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