Gene Shew185_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1195 
Symbol 
ID5373523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1432286 
End bp1432789 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID640829394 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001365409 
Protein GI152999728 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.31213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA TTTATATCAG TCTGGGTAGC AATATCGAGC CTGAACAGCA TCTGCAAGCA 
GGATTGACAT CGCTGCGAGC GTGTTTCGGG CCGCTGCGCC TCTCTTCTAT GTATGAAAGT 
GAAGCGGTAG GTTTCAGTGG CACTAATTTT TTGAATATGG TTGCTAGCGC TGAAACGGAT 
CTTAATATAG CGGCGGTAGT TGCACAGTTT AAGCAAATCG AGCAGAATCA CGGCCGGCTT 
GCCGGGGCAA AGAAATTTAG CCCAAGAACC TTAGATTTGG ACCTGCTGCT TTATGACCAT 
GTGGTATGCC AAACGCCTGT TGTGCTGCCC CGTGCTGAGA TAGTCAATAA TGCCTTTGTG 
TTATGGCCTT TAGCCGAGTT AGCGCCGGAA TTGATTCATC CCGTGGTAGA TAAAAGCTAT 
GTAAGTTTGT GGCAAGAGTA TGACAAAGAT TCACAGCGAC TTTGGCCTGT GACGTTTGAA 
TGGCCCCCAG GGCTGACGTT TTAA
 
Protein sequence
MARIYISLGS NIEPEQHLQA GLTSLRACFG PLRLSSMYES EAVGFSGTNF LNMVASAETD 
LNIAAVVAQF KQIEQNHGRL AGAKKFSPRT LDLDLLLYDH VVCQTPVVLP RAEIVNNAFV 
LWPLAELAPE LIHPVVDKSY VSLWQEYDKD SQRLWPVTFE WPPGLTF