Gene Shew185_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1190 
Symbol 
ID5373784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1428993 
End bp1429436 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID640829389 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_001365404 
Protein GI152999723 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000373209 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAA TTGATCAGCT AAAAGACCAC ATGAAGCAGG CCATGATCGC CAAAGAGAAG 
GCGCGCTTGA GCACTATTCG TATGGCATTA GCCGCCATCA AGCAGATTGA AGTGGATACC
CGCGAATCTC TGACTGATGA ACAGGTTATA GCGGTCTTAA CCAAAATGGT GAAACAACGT
CGTGACTCGA TTGCTCAATT TGAAGCAGCG GGTCGTAACG AGTTGGCCGA CGTGGAAGCA
GCAGAGATTC AAGTTATTGA AGCTTTCCTG CCTACCCCTC TTACAGAGGC GGAAGTCGCG
GCGCTCATCG ATGCAACTAT TGTAGAAGTA GGTGCATCCG CCATGGCGGA TATGGGCAAA
GTAATGGGAG CATTGAAATC TAAAGTGCAA GGACGTGCAG ACATGGGCGC TATCGGCGCT
ATGATCCGTG CTAAATTGCA ATAA
 
Protein sequence
MSLIDQLKDH MKQAMIAKEK ARLSTIRMAL AAIKQIEVDT RESLTDEQVI AVLTKMVKQR 
RDSIAQFEAA GRNELADVEA AEIQVIEAFL PTPLTEAEVA ALIDATIVEV GASAMADMGK
VMGALKSKVQ GRADMGAIGA MIRAKLQ