| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1180 |
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| Symbol | |
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| ID | 5371974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1409445 |
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| End bp | 1412441 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829379 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001365395 |
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| Protein GI | 152999714 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000103368 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTA GAACATTTAG AAAAACCAGA TTGGCCACTA GCCTTTCGCT AGTCTTAGGC
GTGGGCGCTA TCATGCCCGC CTATGCCGCC GATACTGACA AAAAAGAAGA AAATATTGAA
GTTATTCAAG TAACAGGGAT CCGCGGTAGT TTAGTCCGTT CGATGGACGT AAAACGCGGC
TCAGAAGGCA TTGTTGATGC CATTAACGCC GAAGATATCG GTAAATTCCC CGACAGTAAC
TTAGCTGAAT CGCTACAACG TATTTCTGGC GTATCTATCG ACCGTCAAAA CGGTGAAGGC
AGCCGAGTGT CGGTCCGTGG TTTTGGTGCC GATCAAAACT TAGTGCTGTT AAACGGACGT
CAAATGCCCG TCACCACAGG CTCTCGTTCA TTCGACTTTG CCAACATAGC GTCAGAAGCC
ATCAGTGCAG TTGAAGTGGA GAAAACCGCT AAGGCGGAAA ATCCAACGGG CGGTATTGGC
GCAACGATCA ATGTGCTCAC CCATAGACCG CTAAGCTCAC CAGGCATGAA GGCGACTTTC
GGTGCAAAGG CCGTTGATGA CTCATCCACG GATAAAGGCT CTACCACACC AGAGCTTTCT
GGCTTGTACT CAAACACCTT TGCCGATGAT AAATTTGGGA TTTCTATTTC AGGTAGCTAT
CAAGAAAGGG AAAGTGGTAA TCAACAAGCC CAAGTCGGTA CCGGTTGGCG CAGTTTTCCA
GGTATCGTTG ACCAAGATTA CAGCGGCCCC AACGCAGAAT GGGGCGGCGT TCCTAAAAAC
GACAATCAAG TCAATCGCCC TGGCGATGAT GACGTGTATA GCGTGCCGCA AACCACGATT
TACCGTTTTG AAGAACAACA ACGCAAACGC ACCAACGGTC AATTAGTACT GCAATACGAG
CCGATTGACT CGCTGCGCGC AACGCTCGAT TACACTTACA TGCGTAACGA CATCGATACT
CAAACGCACG ACGTCTCGGC ATGGTTCAAC TTTGTGCCGT CCCAAGAAAA TATTTGGAGT
GATGGCCCAG TTTCATCACC ACTCGTTTAT TCCGAAACCT ACGATGCACC CGCCGACCTT
TCAATGGCTG CTGGCGATTT CGGTACCCGC GACCAAAGTG GTTCACTGGG TTTTAACTTA
GCTTGGGAAG CCAGTGATAA TCTGACGTTA AACTTGGATT ACCATAACTC CTACGCCGAA
CGTACGCCTA ACAATGTCAA TGGCAGTACG AGCAACCTCA GTACCGCCGC CTTTATTCGT
ACCAGTGCAG CGACCGATTT TAGCGGTGAT GTCCCAGTAC TCGCCGTTGG TGGTGGAAAT
GCGGTTCGCC CAGAAGATAT GCGCGTGACT GGTTCAACCT TTACCAATGC CGTCAATCGT
TCCGAAATCG AACAGCTGCA AATGTCGGGT AAATATGATT TAGCCGAAGC AGGCAGTATC
GATTTTGGTA TTGCGATGTC AGACGTGAAT AACCACTCCC AACAGGTTGA TATTCAACGT
AACGACTGGG GTGGCGTTGG TGCAGCGGGT GATTTAGATG CTGCTTGGTT CCCGACCAGT
TCAGTTATCG ATAAATTTGA TGGTTCAAAA GGTAATTTCG CAGGTTATAA CGGTAATGCT
TCGACAGATC CACTAAACAC TATGTTTCTG TGGGACTTTG AAGCGGTTCG TGCCCGTGCT
GCAGAACTCT ATGCAACCAA CATAGTGGGT GATTGTGGTA ATGGCTTCTG CCCTTCTACC
GATTACTCCA AAGGCACAGA CCGTTTCACT GAAGAAAAAT CTCAATCTGC CTATATCCAA
TACAACTTCG CCAGCGAAAT TGCCAACATG CCCTATGACG TGCATTTCGG CTTACGCTAC
GAAAAAACAG ATGTTGAATC GACTTCTGTT GTTTCCTCCT ATGATACAGC TACTTGGATT
GCAGAATCTG AAATCGCGCT AACGAGTTCT GTGGATAATA ATCGCGTTTA TCAAACTCAA
AAGGGTGATT ACGATTACCT GCTACCCAGC TTCAACTTTA ATATTGAAAT GCTGGAAGAT
GTGTTTGTCC GCGCCGCCTT TAGCCAAACG ATTGGTCGTC CTGATTACAC CTCGATTCAA
GGTGGCACCA CAGTAGGAAC GCTTGCCTAT CGCAACGGTG GTAGCGGCTC GGCGGGTAAT
CCAAGTCTGT TACCACTCGA GTCAACGAAC TATGACTTGT CGACAGAATG GTATTACAAC
GATGCCAGTT ACGTCTCAAT CGGTTATTTC CGTAAAGATG TGACTAACTT TATCAGCAGT
AACCCTGAAA ACTCAGACAT CTACAACATT CCGGATCCAG CACACGGTAA ATATGTTGAT
GAAGCCATTG CGGCAGGTGC CACCACTGCG ATTCAACAAC GCCAATGGAT TTATGACAAA
TACGGTGCAA CCGATCCGAA TGTGAAGATC AATCCTGATA ACGGCAATAT CGAGATTACC
GGTAACCCAG GTGATCCATC GTTAAACTTC CTCATTACTA ACCCCACTAA CAGTGATTTA
AGTAATGTGA TTGATGGTTG GGAGTTTTCT ATCCAGCACT TCTTTGGTGA GTCAGGATTT
GGTATCCAAG CCAACTACAC TATGGTGGAT GCCGGGGACA GCTATGATAA CACTAACTTA
GGTCGCCCTG GTGATGCGAC CCAGAACGTG ATTTTAGGGA TCAGCGATAC CGCAAACTTG
GTCGGTATCT ATGAAAACTA TGGTTTCTCG GCCCGTATCG CCTATAACTG GCGTGATGAG
TTCTTAAACT CAACAGGTCA GGATACTGGC TCGAACCCTA AATACACCGA AGCTTATTCG
CAGGTGGACT TTAACATAGG CTACGACGTT GAAGCGGTTG AAGGTTTAAC CATCTTCATC
GAAGGCTTAA ACATCACCAA TGAAGCCACG CGTGTACACG GCCGTGCGAC GGAACAAGTC
CTTAACTACA CCCAGACGGG TGCGCGTTAC AGTATAGGTG CACGTTACAC TTTCTAG
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| Protein sequence | MELRTFRKTR LATSLSLVLG VGAIMPAYAA DTDKKEENIE VIQVTGIRGS LVRSMDVKRG
SEGIVDAINA EDIGKFPDSN LAESLQRISG VSIDRQNGEG SRVSVRGFGA DQNLVLLNGR
QMPVTTGSRS FDFANIASEA ISAVEVEKTA KAENPTGGIG ATINVLTHRP LSSPGMKATF
GAKAVDDSST DKGSTTPELS GLYSNTFADD KFGISISGSY QERESGNQQA QVGTGWRSFP
GIVDQDYSGP NAEWGGVPKN DNQVNRPGDD DVYSVPQTTI YRFEEQQRKR TNGQLVLQYE
PIDSLRATLD YTYMRNDIDT QTHDVSAWFN FVPSQENIWS DGPVSSPLVY SETYDAPADL
SMAAGDFGTR DQSGSLGFNL AWEASDNLTL NLDYHNSYAE RTPNNVNGST SNLSTAAFIR
TSAATDFSGD VPVLAVGGGN AVRPEDMRVT GSTFTNAVNR SEIEQLQMSG KYDLAEAGSI
DFGIAMSDVN NHSQQVDIQR NDWGGVGAAG DLDAAWFPTS SVIDKFDGSK GNFAGYNGNA
STDPLNTMFL WDFEAVRARA AELYATNIVG DCGNGFCPST DYSKGTDRFT EEKSQSAYIQ
YNFASEIANM PYDVHFGLRY EKTDVESTSV VSSYDTATWI AESEIALTSS VDNNRVYQTQ
KGDYDYLLPS FNFNIEMLED VFVRAAFSQT IGRPDYTSIQ GGTTVGTLAY RNGGSGSAGN
PSLLPLESTN YDLSTEWYYN DASYVSIGYF RKDVTNFISS NPENSDIYNI PDPAHGKYVD
EAIAAGATTA IQQRQWIYDK YGATDPNVKI NPDNGNIEIT GNPGDPSLNF LITNPTNSDL
SNVIDGWEFS IQHFFGESGF GIQANYTMVD AGDSYDNTNL GRPGDATQNV ILGISDTANL
VGIYENYGFS ARIAYNWRDE FLNSTGQDTG SNPKYTEAYS QVDFNIGYDV EAVEGLTIFI
EGLNITNEAT RVHGRATEQV LNYTQTGARY SIGARYTF
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