Gene Shew185_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1178 
Symbol 
ID5371972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1406785 
End bp1407507 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID640829377 
ProductSapC family protein 
Protein accessionYP_001365393 
Protein GI152999712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.701461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC ACGTATTACT TAACAGCGTA GATCATAAAG ATATTAAAAT TATCACTGAG 
CGTAGTGCTA AGTACGGCGA TAATGTCTGG TTCAGTGTCA CTTTTCCGGC GGAGTTTCGC 
AGCGTACAAG CGCATTATCC GATTTTTTTC CAAAAGGATC AGACCACAGG CCAGTTCTTT 
GCAGTGGCGC TTTATGGTTT TCAAAATAAT GAGAATCTGT TTTTAAATAA CGGCACTTGG 
CAGGCTTCTT ATATCCCTCT CACCCTACGT CGTCAGCCGT TTCTTATTGG TCAGCAAAGC 
GTGCGTGAAG ACGGTGTCGA GCGCAAACAA AGGGTCATAC ACCTCGATAT GGCGAGCCCA 
AAAGTCAGCA CAACCGAAGG CGAAGCTTTG TTCCATCCCT ATGGTGGCAA TACGCAATAT 
CTGGATGACA TTGGGGATAT GTTAGAAGGT ATCCACCACG GGCTTATCGA CAGTAAGCAC 
TTTATCGATT TGCTTATCGA ACATAAGTTG CTGGAATCCT TTACCTTAGA TATCAAGCTC 
GACAATGGCC ACCAACATCA AATGATGGGT TTCTATACTA TTAATGAAGA AACGCTAGCG 
GCCCTTTCGG CAGAAGTGCT CGCTCAATTA CATGCTAAAA GTTATCTAGA GGCGATTTAC 
ATGACCTTGG CCTCACAGGC AAGAGTACGT GACTTGCTTA ACCTTAAAAA TGCGCAAGGT 
TAA
 
Protein sequence
MNQHVLLNSV DHKDIKIITE RSAKYGDNVW FSVTFPAEFR SVQAHYPIFF QKDQTTGQFF 
AVALYGFQNN ENLFLNNGTW QASYIPLTLR RQPFLIGQQS VREDGVERKQ RVIHLDMASP 
KVSTTEGEAL FHPYGGNTQY LDDIGDMLEG IHHGLIDSKH FIDLLIEHKL LESFTLDIKL 
DNGHQHQMMG FYTINEETLA ALSAEVLAQL HAKSYLEAIY MTLASQARVR DLLNLKNAQG