| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1172 |
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| Symbol | |
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| ID | 5373672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1398664 |
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| End bp | 1399941 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829371 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001365387 |
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| Protein GI | 152999706 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.408586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CCAATGATTC ATTGATGGCA CGTCGCCAAG CCGCAGTTGC GGGTGGTGTC
GGGCAAATTC ACCCGATCTT TACCGCGCGC GCCGAAAACG CGACCGTGTG GGATGTTGAA
GGGCGCGAGT TTATCGATTT TGCGGGCGGC ATTGCTGTGC TTAATACCGG TCATCTTCAC
CCTAAAGTGA AGGCAGCGGT TGCGGCTCAG CTGGATAATT TCTCCCACAC TTGTTTTATG
GTGCTTGGTT ACGAGAGCTA TATCCAAGTG TGTGAAAAGC TCAATCAATT GGTGCCAGGG
GATTTTGCCA AGAAGACGGC ATTATTCACT AGTGGTTCAG AAGCGGTTGA AAACGCAGTT
AAAGTGGCGC GTGCCTATAC CAAACGTGCT GGCGTGATTG CGTTTACCTC TGGCTACCAT
GGTCGCACTA TCGCGGCCTT AGCACTGACC GGAAAAGTCG CGCCTTACAG TAAAGGTATG
GGTCTGATGT CGGCGAATGT GTTCCGCGCT GAGTTCCCCT GCGAGATGCA CGGCGTGTCC
GATGATGATG CTATGGCTTC GATTGAACGT ATTTTTAAAA ATGATGCCGA GCCAAGTGAT
ATTGCCGCCA TTATTTTAGA GCCAGTACAG GGCGAGGGTG GTTTCTACGC CGCATCACCT
GCTTTTATGC AGCGGTTGCG GGCATTGTGT GATCGTGAGG GCATTATGCT GATCGCCGAT
GAAGTGCAAA CGGGCGCTGG TCGTACTGGT ACCTTCTTTG CCATGGAGCA AATGGGCGTG
AGTGCGGATA TCACCACTTT TGCTAAATCT ATTGCGGGTG GTTTCCCTCT TTCGGGCATT
ACTGGCCGCG CGCAAGTGAT GGATGCGGTG GGGCCTGGTG GTCTTGGCGG TACGTATGGT
GGCAGCCCGT TAGCGTGCGC CGCAGCGCTT GCTGTCATTG AAGTGTTTGA AGAAGAAAAG
CTGTTAGACC GCGCCAATAC CATAGGTGAG CGCATTAAGT CTGCATTGAA TGTGATGCAA
GTCGAGCATG CACAAATCGC CGATGTGCGT GGTTTAGGCG CGATGATCGC CATTGAATTA
ATGGAAGATG GCAAGCCTGC ACCGCACTAT TGCGCGCAAG TGTTGGCTGA TGCCCGTGAC
CGTGGATTGA TTTTATTATC CTGCGGCACT TACGGTAATG TGCTGCGTAT TTTGGTGCCA
TTAACCGCGC CGGATGCACA AATTGATGCA GGCCTTGGTA TCCTCAAAGC CAGCTTCGAT
GCCGTTTTGA AAAGCTAA
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| Protein sequence | MTTTNDSLMA RRQAAVAGGV GQIHPIFTAR AENATVWDVE GREFIDFAGG IAVLNTGHLH
PKVKAAVAAQ LDNFSHTCFM VLGYESYIQV CEKLNQLVPG DFAKKTALFT SGSEAVENAV
KVARAYTKRA GVIAFTSGYH GRTIAALALT GKVAPYSKGM GLMSANVFRA EFPCEMHGVS
DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGRAQVMDAV GPGGLGGTYG
GSPLACAAAL AVIEVFEEEK LLDRANTIGE RIKSALNVMQ VEHAQIADVR GLGAMIAIEL
MEDGKPAPHY CAQVLADARD RGLILLSCGT YGNVLRILVP LTAPDAQIDA GLGILKASFD
AVLKS
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