| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1167 |
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| Symbol | |
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| ID | 5372592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1392732 |
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| End bp | 1393868 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829366 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001365382 |
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| Protein GI | 152999701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0114763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCA CCTCGGGCGT CACCAATAAA CCGACAACAA AGACGCAAGA AAAAGTACTG
CTCAGAATTG AGCGGGTAAG CAAGTTATTC GATGACGTAC GGGCTGTCGA CGACGTGTCA
TTAACTATCA ATAAAGGCGA AATCTTTGCT TTACTCGGCG GCTCAGGCTC GGGTAAGTCG
ACGTTATTGC GCATGTTAGC GGGATTTGAA AAGCCCACCT CTGGCCGTAT TTTCCTCGAT
GGCGAAGACA TCACAGATTT ACCCCCATAC GAACGTCCGA TCAATATGAT GTTCCAATCC
TATGCTCTGT TTCCCCACAT GACAGTGGCG CAAAACATTG CCTTTGGTTT GAAGCAAGAC
AAGTTACCTA AGGCCGAAAT TGAGCAGCGC GTACAAGATA TGCTCAAGCT AGTACACATG
GAGCAATACG GTAAACGTAA GCCGCATCAG TTATCCGGTG GTCAACGTCA GCGTGTTGCC
TTGGCTCGTT CACTGGCAAA ACGGCCGAAA TTATTACTGC TCGATGAGCC TATGGGCGCA
TTGGACAAAA AACTGCGTAC CCAGATGCAA CTCGAAGTGG TTGAAATTCT TGAGCGTGTC
GGTGTGACCT GCGTGATGGT GACCCACGAT CAGGAAGAAG CCATGACAAT GGCGGGGCGC
ATTTCCATTA TGAGCGACGG TTGGATTGCC CAAACTGGCT CGCCAATGGA TATTTACGAA
AGCCCGAATA GCCGCATGAT TGCCGAGTTT ATCGGCACTG TGAACTTGTT TGGTGGCGCG
ATTGAAGTGG ATGAAGTCGA CCATTTGATC ATTAAACCTA ATGAGTTGGC TCAATCTTTT
TATGTCGGTT ACGGGGTGTC GACCAACGTC GAAGACAAAA ACGTGTGGCT CGCTGTGCGT
CCTGAAAAGA CCATTATTAG CCGCGAACAG CCTGAAGGTC AGTACAACTG GGCCAAGGGA
ATCGTACACG ATATCGCGTA TTTAGGCGGT ATTTCAGTGT ATTACATTCG TTTAGAGAAT
GGTCAAATCG TCCAGTGCAG TATGACTAAC CGTGAACGCC GCGCCGATCA TGCCACATGG
GATGACGAAG TGTTCATCAG TTGGGAGGAC ACCAGTGGCG TGGTGTTGAG ATCATGA
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| Protein sequence | MAITSGVTNK PTTKTQEKVL LRIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE KPTSGRIFLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQDMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR ISIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGTVNLFGGA IEVDEVDHLI IKPNELAQSF YVGYGVSTNV EDKNVWLAVR
PEKTIISREQ PEGQYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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