Gene Shew185_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1164 
Symbol 
ID5371514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1388732 
End bp1389493 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content48% 
IMG OID640829363 
Productpeptidase C26 
Protein accessionYP_001365379 
Protein GI152999698 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.399023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCG ATTTGCCCCT CATAGGTGTT ATTGCTTGTA ATCAACAACT GGGTTCACAT 
CCCTTTAATA TTGTTGGTGA AAAATATCTA TTAGGTGTAG TTAATGGCGC GAAAGGCTGG
CCGTTAGTGA TCCCATCGTT AGGCGGCGAT TTACCGATAG ACGCGATTTT AGAACGTCTT
GACGGTATTT TGTTTACTGG CTCTCCTTCT AATGTAGAAC CCCATCTTTA TGCAGGCCAA
CCGAGCGAGC TTGGTACACA CCATGATCCT AAACGTGATG CGACGACTTT GCCGCTGATC
CACGCTGCTA TTGCTGCTGG GGTACCTGTA TTAGGTATTT GTCGCGGTTT TCAAGAAATG
AATGTGGCCT TTGGTGGCAG TTTGCACCAG AAGTTATATG AGGTGGGTGG CTTTATTGAA
CATAGAGAAG ATAAAACCGC ATCCTTAGAT GTGCAATATG GGGCTTCTCA CAGTATTACT
GTTGAGCCTG GGGGGCTTAT TTACGAGGCC TGGGGCCGTA ACTCTGCAGA GGTCAACTCT
GTGCATACTC AAGGCGTGGA GCGTCTGGGT GTTGGGTTGC GGCCAGAAGC TTATGCTCCA
GATGGGTTAG TGGAGGCTTT CTCCGTAATA GGTACTAAAG AATTTGCCCT CGGTGTGCAA
TGGCATCCAG AGTGGAAGGT GAGCGAAAAT CCGTTTTACC TCTCCCTTTT CAATGCCTTC
GGTGATGCAT GCCGGCGCAG GGCTACAACT CGAGTGAAAT AA
 
Protein sequence
MSADLPLIGV IACNQQLGSH PFNIVGEKYL LGVVNGAKGW PLVIPSLGGD LPIDAILERL 
DGILFTGSPS NVEPHLYAGQ PSELGTHHDP KRDATTLPLI HAAIAAGVPV LGICRGFQEM
NVAFGGSLHQ KLYEVGGFIE HREDKTASLD VQYGASHSIT VEPGGLIYEA WGRNSAEVNS
VHTQGVERLG VGLRPEAYAP DGLVEAFSVI GTKEFALGVQ WHPEWKVSEN PFYLSLFNAF
GDACRRRATT RVK