Gene Shew185_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1163 
Symbol 
ID5371950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1387484 
End bp1388032 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID640829362 
Productcupin 2 domain-containing protein 
Protein accessionYP_001365378 
Protein GI152999697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.967119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATTG GAGCCAGCCT CAAAACTGTT CGAAAAATGA AAGGCTTATC TCAACGAGAA 
TTGGCCAAAC GTGCTGGTGT GACTAACAGT ACGATTTCAA TGATCGAGAA AAACAGTGTT
AGCCCGTCAG TCAGCTCTCT AAAAAAAGTG CTGTCGGGTA TCCCTATGTC TTTAGTGGAT
TTTTTCTCCA TTGAGGCCTC TGCGGATAGT GAGCAAAAGG TCGTCTATCG ATCCAATGAA
TTACTGGATA TCGGCACTGG ACCACTTGAA TTTAAACTGA TCGGCCGTGA TTATCCGAAT
CGCGCTATGT CAGTGATGAG TGAAATTTAT CCGCCCGGTT CAGATACGGG TGAAGAAATG
CTGAAGCACG AAGGTGAAGA GGCTGCCATG GTGATCGAAG GTAAATTCGA ACTCACTGTG
GGTGATGAAG TGTATATTTT GGAAGCGGGT GACAGTTACT ACTTTAACAG TGAAGTGCCC
CATAGATTCC GCAATCCCTT TGATGAACCT TGCCGTTTGG TGAGTGCGAC TACGCCTGCG
AACTTCTAG
 
Protein sequence
MDIGASLKTV RKMKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGIPMSLVD 
FFSIEASADS EQKVVYRSNE LLDIGTGPLE FKLIGRDYPN RAMSVMSEIY PPGSDTGEEM
LKHEGEEAAM VIEGKFELTV GDEVYILEAG DSYYFNSEVP HRFRNPFDEP CRLVSATTPA
NF