| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1160 |
|---|
| Symbol | |
|---|
| ID | 5369399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1384214 |
|---|
| End bp | 1385071 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640829359 |
|---|
| Product | rhodanese domain-containing protein |
|---|
| Protein accession | YP_001365375 |
|---|
| Protein GI | 152999694 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC CACTAGTAAG TACGCAGTGG CTCGAAGCAC ACCTCACCGA TCCCCATTTA
GTCTTGCTCG ATGCCAGTAT GGAAACCGTT ATTGGTAAAG AGCCCCTAGT TTACGATGAG
CCTATTTGCA TTCCGCGCTC ACGTCGATTC GACTTGGAAA ATGTGTTTTG CGATAAGACT
TCAACTCAAA TCCATGCCTT GCCGACGTTT GAGCAATTCA GCCAAGGGAT AGCGCAACTT
GGGATTGAGG CCGACAGTGT TATCGTTATC TATGATAACC AAGGCATTTA TTCATCTCCA
CGGGCGTGGT GGACCTTTAA AGTTATGGGC TTTAATCGAG TCTATGTACT CGATGGTGGC
TTGCCTCAGT GGATTGAAGA AGACCGCATC ACCTCATCGC GTTATCAAGC CGAAGGCGTC
GATTACGGCC CGACGGATAT CGATACATTA GCTGATGTGC TGCAATACCA CCCCGAGCGG
GTGATGGATG CCGAGGCCGT GTTATCACGT ATCGAAGATG CCGGAACCGC GATTGTCGAT
GCCCGTGGTG CGCCACGCTT TTTAGGCCAA GTGAGTGAGC CGCGCCCCGG TGTGCGCTCA
GGGCATATTC CTCGCTCGGT TAACTTACCC TTCGCTCAAG TGCTCGATGG CAATAAAATC
AAAACGACCA GTGAGTTACA GGCTATTTAT CAAGGGCTAA CAGCAGACAA GTCCGCACGG
ATATTTAGCT GTGGCTCTGG GATTACGGCG TGTATTTTGA TTTTGGCTTC GGTTGCGGCA
GGGCATACAC ATCCCATCCT CTATGATGGC TCGTGGGCGG ATTGGGGCAG TCGTACCGAT
CTGCCAATTG AGTGCTAA
|
|---|
| Protein sequence | MEYPLVSTQW LEAHLTDPHL VLLDASMETV IGKEPLVYDE PICIPRSRRF DLENVFCDKT
STQIHALPTF EQFSQGIAQL GIEADSVIVI YDNQGIYSSP RAWWTFKVMG FNRVYVLDGG
LPQWIEEDRI TSSRYQAEGV DYGPTDIDTL ADVLQYHPER VMDAEAVLSR IEDAGTAIVD
ARGAPRFLGQ VSEPRPGVRS GHIPRSVNLP FAQVLDGNKI KTTSELQAIY QGLTADKSAR
IFSCGSGITA CILILASVAA GHTHPILYDG SWADWGSRTD LPIEC
|
|---|
| |