Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1154 |
Symbol | |
ID | 5370826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1376024 |
End bp | 1376749 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640829353 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001365369 |
Protein GI | 152999688 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.161045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATATCT TCAAGCCAAT TAAGCAGATA AAAGCATCGA GTGAGGTTGG GCAGCAACTG AAAAATGCTA TTTTAGGTGG CGAATATAGA GCGGGTGATA AACTGCCTTC CGAGCGTGAA TTGATTGAGC TATTCCAAGT GAGTCGCACT GTCGTCAGAG AAGCAATCAA GAGCATTGAA GCGAGTGGAT TAGTCGAAAT TCGCCAAGGA GCAACGGGTG GCGCATTTGT TAAACACTTA ACCTTTGAGC GATTAAGTGA TGCCTGCAAT GACTTGTTTA TGATGGGTAA ACTTTCACTA CCAGAGTTAT GTCAGGCACG TATGCTGATT GAGCCACAAG TAGCGAGAAT GGCCGCCCGA AATTGCACAC CGGAGCAAGC TTTAGCGCTA ATTGAGGCCA ATAGTCATGA AAATGATTCA TACGCTTATC CAGATACCGT CGCCTTACGT TCAGAGGTGC ATTATTTATT AGCTGAAATG GCAGGCAACC GTTTTCTCGA GGCAATCGTT AAATCATTAT TGATTTTATT ACGTAATCAG ACGATTAAAT TTGAACCACC AACAGATGAA ATCCATCCAC TAGGGTTACA TGGTGTGATT ATTGACGCTG TGATCGCCAA TGATGAAGAT AAAGCTGAAG CAGAGATGTT TGCGCACTTA GAAGATTTTA ATATACGCCT TCGAAAAATT GAGTGTAAAT ACTTAGATAA ACAGCGTAGT TTATAG
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Protein sequence | MHIFKPIKQI KASSEVGQQL KNAILGGEYR AGDKLPSERE LIELFQVSRT VVREAIKSIE ASGLVEIRQG ATGGAFVKHL TFERLSDACN DLFMMGKLSL PELCQARMLI EPQVARMAAR NCTPEQALAL IEANSHENDS YAYPDTVALR SEVHYLLAEM AGNRFLEAIV KSLLILLRNQ TIKFEPPTDE IHPLGLHGVI IDAVIANDED KAEAEMFAHL EDFNIRLRKI ECKYLDKQRS L
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