Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1150 |
Symbol | |
ID | 5370500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1370555 |
End bp | 1370920 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829349 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001365365 |
Protein GI | 152999684 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00929773 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTGA GCATCAACGC CATTATTCGC TTTGCTACGG CGCAAACACC CGTCGAGACC TATCAGTTAC CGGCGGAAAA GTTGTTAGCA GGCAATCCAA CTCAAGGGCT AGAGAATCAT TATTCTAGTC CTTGTGATCA ATTTCACAGT GGAATTTGGC AAAGTGAATC AGGCGCTTGG AAAATAAACT ACACTGAATA CGAGTACTGC GAAATCCTCG AAGGGATAAG TGTTATCACA GATCTTCAAG GTCAATCGCA GACGTTCACT GTGGGCGACA GGTTTATTAT ACCCGCGGGT TTTCAAGGCA CTTGGGAAGT CGTGGAACCC TGCCGCAAGG TTTACGTCAT TTTCGAACAA AAGTGA
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Protein sequence | MTVSINAIIR FATAQTPVET YQLPAEKLLA GNPTQGLENH YSSPCDQFHS GIWQSESGAW KINYTEYEYC EILEGISVIT DLQGQSQTFT VGDRFIIPAG FQGTWEVVEP CRKVYVIFEQ K
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