Gene Shew185_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1149 
Symbol 
ID5370499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1369649 
End bp1370371 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID640829348 
Producthypothetical protein 
Protein accessionYP_001365364 
Protein GI152999683 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0395177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATAACA ATCTGAATAA AAAACGGCTG GTACAGCTTG TCGGACTCGC GCTAACCACG 
ACCCTATTCT CCGGCATGGC CGCCGCCGAA GTAACAGGGG AAATTAGTCT CACTAACGAC
TATCGTTTCC GCGGCGTTTC ACAAACCGCT GGCGATCCAG CCCTGCAAGG CGGTATTGAT
TGGAGCTTCG ACTCGGGTTT CTCTGTCGGC GCTTGGGCAA GTAACGTGGA TTTTGATGAG
CCAGGTTATA ACGGCCCTGC TATCGAATAC GATTTCTATG TCGCCTATGG CGGTGAGATC
AACGAAGATC TGACCTACGA CATTACCCTT AACCGTTATA ACTACTCAGG CGAAAGTGAC
ATTGGCTATT TTGAAGTTAC AGCTGGCATG GATTATAAAG GCTTTCGTGC CGCTTACTGG
TACACCAATG ACTACGGCGG TAGTGATTTA GACTATCACT ATGCTGAGCT TAACTATTCC
TATGAATTTG TTGAGAACTG GAGTATCGAT CTGCACTATG GTTACAACGT TGGTGATGCA
TTGGATGACG GTGAAGGCTT TGATAGCTAC TCAGATTACT CTGTTGGCGT ATCGACTGAA
CTGTCAGGCT TTGGGCTTTC TCTCGCTTGG TTAGGCACAG ATCTTAGCGG CGACCAAAAG
GTCTCTGATG GCGCATTCAA AACCTCAGAT ACCATACTTG CGAGCGTAAG TTACGCGTTC
TAA
 
Protein sequence
MYNNLNKKRL VQLVGLALTT TLFSGMAAAE VTGEISLTND YRFRGVSQTA GDPALQGGID 
WSFDSGFSVG AWASNVDFDE PGYNGPAIEY DFYVAYGGEI NEDLTYDITL NRYNYSGESD
IGYFEVTAGM DYKGFRAAYW YTNDYGGSDL DYHYAELNYS YEFVENWSID LHYGYNVGDA
LDDGEGFDSY SDYSVGVSTE LSGFGLSLAW LGTDLSGDQK VSDGAFKTSD TILASVSYAF