Gene Shew185_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1146 
Symbol 
ID5372629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1365449 
End bp1366585 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID640829345 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_001365361 
Protein GI152999680 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0305346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA CCTTGATCGC CGAGCGTATT TTTGATGGTG AATATTTCCA TCAAGATGTG 
CCTGTTACTG TCGAAGACGG GCACATTCTG GCGTTTGATA CGGTTGTTGG CGCGAAGGAA 
ATCCGCCAAG CCGGAACGCT GGTGCCAGGT TTTATCGATG TACAAGTGAA CGGTGGCGGC 
GGGGCGTTAT TCAATGCCGA TCCGAGTGTT AATTGCATTG AAACTATCGG CCGTGCCCAT 
GCACGTTTTG GCACGACAGG TTTTTTACCT ACGCTTATTA CCGACGATGT CAGCGTGATG 
GCCAATGCGG CCGATGCTGT GGCCGAGGCT TTAGTCAAAG GTAGCGCTGG CGTTTTAGGG 
GTGCATTTTG AAGGACCACA TTTATCTGTG CCTAAAAAAG GTGTACATCC GCAGGGTTTT 
ATTCGTGAAA TAACCGATGC TGAACTCGCA GTATTTTGTC GTCAAGATCT GGGTATTAAA 
GTTGTCACGC TTGCGCCTGA GAATGTGTCG CCAGAGGTGA TCCGCACGCT CGTCGCGGCG 
GGCGTTAAGG TGTGTTTAGG CCATTCTAAT GCCGATTACG ATACTGTGAT TGCAGCATTA 
GCGGCAGGCG CGACGGGCTT TACCCATCTT TATAATGCGA TGTCACCACT GGGTTCCCGT 
GAGCCTGGAA TGGTTGGCGC GGCGATTGAG AGTGAAACCG CTTGGTGTGG TTTGATTGTC 
GATGGTCACC ATGTGCACCC TGCGGCGGCA AAGGTTGCAC TACGGGCAAA ACCGAGGGGC 
AAGATGATGT TAGTCACCGA TGCTATGCCG CCTGTGGGTA TGGAGGATGA GACTAGCTTC 
GAGCTCTTTG GTACTCGAGT GTTAAGAGTC GGCGACAGAT TAAATGCTGT GACAGGTGAG 
CTGGCGGGCT GTGTGCTCGA TATGGCAACT GCGGTCAATA ATACTGTGAA CTTGTTGGGT 
TTACCTTTGG CGGAAGCCTT AAGAATGGCG GCGTTATATC CCGCGCAATT CCTCGGGATT 
GACCATAAGG CTGGCCGTTT AGCACTGGGA TACAGGGCTG ACTTTGTCTT GCTCGATGCG 
CAGAACAAAG TGCAGGCAAA CTACATTGCA GGACAAGCCG TTTATGCACA CCCTTAA
 
Protein sequence
MKITLIAERI FDGEYFHQDV PVTVEDGHIL AFDTVVGAKE IRQAGTLVPG FIDVQVNGGG 
GALFNADPSV NCIETIGRAH ARFGTTGFLP TLITDDVSVM ANAADAVAEA LVKGSAGVLG 
VHFEGPHLSV PKKGVHPQGF IREITDAELA VFCRQDLGIK VVTLAPENVS PEVIRTLVAA 
GVKVCLGHSN ADYDTVIAAL AAGATGFTHL YNAMSPLGSR EPGMVGAAIE SETAWCGLIV 
DGHHVHPAAA KVALRAKPRG KMMLVTDAMP PVGMEDETSF ELFGTRVLRV GDRLNAVTGE 
LAGCVLDMAT AVNNTVNLLG LPLAEALRMA ALYPAQFLGI DHKAGRLALG YRADFVLLDA 
QNKVQANYIA GQAVYAHP