| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1136 |
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| Symbol | |
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| ID | 5373252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1349641 |
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| End bp | 1352319 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640829335 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001365351 |
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| Protein GI | 152999670 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA AAACGATAAT AAAGTTATGG AAGGGAAACG AGATGCGACC ATCAATCTTT
AAGAAAACTG TACTAGCAAC AAATATTGCT ATCCTACTCG GCAGTGCTGT ATCCATCAGC
GCTGTCGCTG CAGATGCCGC GGCAACCACC GCAGCGCCTG AAAATATTGA AAAAATTGAA
GTTCGCGGTA TTCGCGCTTC CCAGCAAGCT AACTTAAATG CCAAACGCTT CTCAGACAGT
ACTGTTGATG CGATTACTGC TGAAGACATT GGTAAATTCC CTGATAAAAA CGTTGCAGAA
TCGCTGCAAC GTATTCCAGG TGTCACGATC CAGCGTCAAT TTGGTGAAGG CGCAGGTGTT
TCTATTCGTG GTGCAGGTCA AGATTTGACT TTGACTACTC TGAATGGACA AAACGTGGCT
TCAACAGGTT GGTTTGTTCT TGAGCCTGCA AAACGCTCAT TTAACTATGA ATTATTACCA
TCTGAATTAG TTGGTAACTT AGAAGTCTAT AAATCATCTC AGGCGGACTT AGCTGAAGGT
GGTGTGGGTG GTACTGTTGT AGTTAATACT CGTAAGCCAT TGGATATGGA TTCAATGACT
TTCTTTGCAT CTGCTGAAGC TCAATATCAA AGCGATTCGG GTGAAACGGA CCCACAATTT
TCAGGCTTAG GTAGCTGGAA GAATGATGAT GAAACTTTTG GTGTATTAGT TTCTGGCGTT
ATGCAAAATC GTAGCTTACA GCGTCAAGGC GATGAAGCGT TTTGGGAATG GGGTGCAGGC
CCTGTTGCAT TTGAACAAGA GCGTGAGCGT TCCGCTATTG CTGCAACATT CCAGTATGCG
CCATCTGATT CATTAAACTT TGTGTTTAAC GCGATGGACA TGCAAATGGC CGCGGACAAC
ACCAACTACG CATTATGGTT TACGCAAGCT GACACCTCAT GGTCAGGAGC TCCAGGTTCT
GGTGCTTGGG ATAACACGGA ATGGTTAGGT GGCTGCGGTT TATGTGGTGG TGATAAGCCA
GATGCATCAC AGTCAGGTTC TCAAGTTGCA GGCCCTGTTA ACTTAGCATA TTGGCAAGCT
CGCCCTCGTG AAGCGACAAT GAAGTCTCAA GTTTTCGACC TGAAGATGGA ATATAGCGGC
GATGGATACC AGTTTACGAC TCAAATCGGT GATACAAGCT CTACTGGTGG TACCGATTTT
GAAATGGTTG TTGAAGATGG TCTGGGTGGC ACAGCATTAA ATGGTGCGAC TTACGACTTT
ACCAATGGTC ATCAAACTTG GGATTTGAAT GGTTTTGATA CAGCCACTTA TGATCCTGGT
TCACTTGTAA TGGGTACTGG CAGTAACTTT AATAAAACAC CCAAAACGGA TGATGAAACT
TATATTCAAG CCGATATTAA GTTTGATGTA GATCTAGGTG TGGTTAATGC CATTAAAACG
GGTCTGAAAT ATGCGAAGCA TAATACAACG AGTCGCCGTT TTGACTTTGT ACAAGCCGAT
GACTTTAATC CCATCATATC AACAGCAGGC TTAAATACTG GTACTTTTGC TGTAGGAACA
AGTGAATACG ATATTATTCG TTTTGATCCA GATGCACTAA AAGATTGGGC CAAATCGAGC
ATCATAGGTG AGACTGAAGA TTTTGGTTCA TACCGTGAAA TTGACGAAGA TAACTACGCT
GCTTATGTGA TGGCTAACTT TGCATCAGAA GGCGTACGCG GTAACTTTGG TGTGCGTTAT
GCGGGGACTG AAGCAACTTC AACTTACTAT GTTGATGGCA AGAAAACCGA TTCTTCGGCT
AATTATGGGG AATGGTTACC AAGCTTGAAC GTTGCATTCG ACTTAGCACC AGATCTCATA
TTGCGCGCAT CTGCAGCTCG AGTTATGGCT CGTCCACAGT ATGATGACAT GTATGTTAAC
CCTAACGTTT TAGGTGCGAA TGATGATGTG CCTAATAACC AAAAATGGGT TGTTGGTAAT
ATCGGGTTAA AACCATTTAT TGCTAATCAA ATAGACTTAG GTATTGAATG GTATTTCAAT
GAAGAGTCAT TACTTTCTGC GGCTTTGTTT ATGAAGGATG TTAAAAACTT CGTAACCTTT
AGTGAGTACC ATGCAGATAG CGCCGATATC CCATTTACTG GCACGTTAAA ACCTGATGAA
GTTGCTGGTG GTTGGACTGT GCAAGAGAAA GCCAATGGCG AATCTGCGAC AATCCAAGGT
TTAGAACTGC AATATCAACA AGACTTTGGT AACGGCTTCG GCTCAATTGT TAACTACACT
TATACTGATA GTGAAACGAG TCCAAATACA TATACAGATC GCAACCCGTT CTTAAGCGAT
AGTTCAAAGC ATTCATATAA CTTAACTGGT TATTTTGAAA ACGATTTGTT CCAAGTTCGT
TTAGCATATA ACTGGCGTAG TGAGTATATG ATCCGTGAAA CTGGTTCATA CGGTAATCGT
TTACACGATG CATTTGGTAG CTTGGACTTG AGCGCAATTT GGCATGTTAC TGATTATATG
GATATTAAGC TTGATGGTAA TAACCTGTTA GAAGAAGGTT CACGTCAGTT TGGTAACAAT
CAGTTCCAAT CTAATCTAAG TGGCTTTACG GATGGCTTCC CTGTATTTGA ATACAATATG
GCCCGCCGAA TTACATTAGG TGCTAGCGTA CGATTCTAA
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| Protein sequence | MNTKTIIKLW KGNEMRPSIF KKTVLATNIA ILLGSAVSIS AVAADAAATT AAPENIEKIE
VRGIRASQQA NLNAKRFSDS TVDAITAEDI GKFPDKNVAE SLQRIPGVTI QRQFGEGAGV
SIRGAGQDLT LTTLNGQNVA STGWFVLEPA KRSFNYELLP SELVGNLEVY KSSQADLAEG
GVGGTVVVNT RKPLDMDSMT FFASAEAQYQ SDSGETDPQF SGLGSWKNDD ETFGVLVSGV
MQNRSLQRQG DEAFWEWGAG PVAFEQERER SAIAATFQYA PSDSLNFVFN AMDMQMAADN
TNYALWFTQA DTSWSGAPGS GAWDNTEWLG GCGLCGGDKP DASQSGSQVA GPVNLAYWQA
RPREATMKSQ VFDLKMEYSG DGYQFTTQIG DTSSTGGTDF EMVVEDGLGG TALNGATYDF
TNGHQTWDLN GFDTATYDPG SLVMGTGSNF NKTPKTDDET YIQADIKFDV DLGVVNAIKT
GLKYAKHNTT SRRFDFVQAD DFNPIISTAG LNTGTFAVGT SEYDIIRFDP DALKDWAKSS
IIGETEDFGS YREIDEDNYA AYVMANFASE GVRGNFGVRY AGTEATSTYY VDGKKTDSSA
NYGEWLPSLN VAFDLAPDLI LRASAARVMA RPQYDDMYVN PNVLGANDDV PNNQKWVVGN
IGLKPFIANQ IDLGIEWYFN EESLLSAALF MKDVKNFVTF SEYHADSADI PFTGTLKPDE
VAGGWTVQEK ANGESATIQG LELQYQQDFG NGFGSIVNYT YTDSETSPNT YTDRNPFLSD
SSKHSYNLTG YFENDLFQVR LAYNWRSEYM IRETGSYGNR LHDAFGSLDL SAIWHVTDYM
DIKLDGNNLL EEGSRQFGNN QFQSNLSGFT DGFPVFEYNM ARRITLGASV RF
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