| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1135 |
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| Symbol | |
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| ID | 5373251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1348238 |
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| End bp | 1349254 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640829334 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001365350 |
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| Protein GI | 152999669 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA CTATCAACGA CGTAGCTAAA TATGCTGGAG TGTCTATAAA GACAGTATCC
CGTGTCACAA ATAACGAACC TTCAGTAAAG CAGGCCACAG TTGACAAAGT GAACGAGGCG
ATAAAAGCGC TTAACTACCA ACCGAATTTA GCGGCGAGAA ACCTCGCGGG TACTAAATCC
TATGCTATTG GTTTTATTTA CGATAATCCA AACGCTTACT ACATTATTGA TATGCAAAAT
GGGATCTTGG CAGCCTGTAA AGACAAGGGC TATGAACTTG TCATCCACCC TTGCAATGCC
AAATCAGAGA CCATTTGTGA TGAGCTTACA GCACTAGTCA AATATTCTAG GCTAGCGGGA
TTAGTACTGA CGCCTCCCTT GTCAGAAGAT CCGAAAGTAC TCAAAGCGCT TACTGAGATT
GATGCTAACT ATGTGCGCAT TATTGCAGGT GAAAAGGACA ACGATCAGAA TGGATTGACT
ATTTTAGTCA ACGATAAATT TGGTGCAGTT GAAATCACCC AGCATCTGAT TGACTTAGGC
CACAAGCATA TTGCGTTTTT AAGTGGGGAT TTACACCATG AATCCACCAA AGAACGGTTA
CTTGGTTTTA AACAAGCATT AACAATAAAT GGCCTAACAC TGAATGAAAA CTACATAATT
GAAGGGAAGT ACTCATTTGA GTCTGGTGTT GACGGTGCGA ATAAGCTTAT TAAACTAAAA
CATCGTCCGA CTGCGATTGT GGCTTGTAAT GATGAAATAG CCGCTGGAGC ACTTTTTGCG
GCTCGTTTAG CGGGTTTAGA TATCCCTGCA GACTTATCGA TTGTCGGTTT CGAAGATAGC
CCATTCTCAC GTCAAACCTG GCCTAAACTC ACCACAGTAC ATCAGCCAAA CGCAGAAATA
GCGCAAGTCG CAACGGAATT ATTAATCGCA AAACGTCGCG AGCAAGATGC GATATATTCT
AAGACCTTTA CACCTGAACC TATCATTCGT GACTCGTCGG CAATTCCTAA ACAATAA
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVK QATVDKVNEA IKALNYQPNL AARNLAGTKS
YAIGFIYDNP NAYYIIDMQN GILAACKDKG YELVIHPCNA KSETICDELT ALVKYSRLAG
LVLTPPLSED PKVLKALTEI DANYVRIIAG EKDNDQNGLT ILVNDKFGAV EITQHLIDLG
HKHIAFLSGD LHHESTKERL LGFKQALTIN GLTLNENYII EGKYSFESGV DGANKLIKLK
HRPTAIVACN DEIAAGALFA ARLAGLDIPA DLSIVGFEDS PFSRQTWPKL TTVHQPNAEI
AQVATELLIA KRREQDAIYS KTFTPEPIIR DSSAIPKQ
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