| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1131 |
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| Symbol | |
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| ID | 5373565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1344980 |
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| End bp | 1345474 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640829330 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001365346 |
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| Protein GI | 152999665 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTAA TCTCAAAAGG GTTCACATTA GTAGAACTGA TGGTAACGAT CGCTGTCGCG
GCAATTTTGT TAGCAATAGG CGTTCCATCA CTTACGTCAC TATACGAAGG GACACGCAGC
ACTAATGAAA TACGAAAAAT TAGCGATGTG TTTGCCTTTG CAAGAAATCA AGCCGTCAAC
TATGGTGCCA CGGTTACTGT TTGCCCATAC GCAGCATCTC CATGCGGTAC TGACTGGAAT
AAAGGATTCA GTGTTTATAT TGATAATGGA GGAGCAAAAA ATGTACTCAA AGTAATTGAT
AGTTTTAATG AGCATGATGT CATTTCACTA TCGGGGCCAG CTGATAAAAA AGTGGACTTC
ACACCAGATG GCTTAGTATC AGTCGAAACA TCAATAATTT ATTGTTCAAA CGGGAAAAGT
GACGGTTCTA AAAGCCTTAA GATTAGTACT TCAGGTTTGA TAAGAGAAGG CGCAGATGGG
CAAAGCTGCA CATAG
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| Protein sequence | MLVISKGFTL VELMVTIAVA AILLAIGVPS LTSLYEGTRS TNEIRKISDV FAFARNQAVN
YGATVTVCPY AASPCGTDWN KGFSVYIDNG GAKNVLKVID SFNEHDVISL SGPADKKVDF
TPDGLVSVET SIIYCSNGKS DGSKSLKIST SGLIREGADG QSCT
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