| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1128 |
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| Symbol | |
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| ID | 5369787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1340673 |
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| End bp | 1344182 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640829327 |
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| Product | type IV pilin biogenesis protein, putative |
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| Protein accession | YP_001365343 |
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| Protein GI | 152999662 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTA AAAGGCTGGC TTGTTCTACA CTACTTGTGC TGACTTTTGT GTCGGCTTAC
TCCTTTGGTG ATGATACTGA ATTGTATGTA AAAGAGTCGA CAACTCGAAC AGGCGCAAGA
CCGAAAGTAC TTGTCATATT TGATAACTCG GGAAGTATGT CGACAGAAGA AATCACTCAG
GTTGTAGATT ATGACCCTAA CTATGACTAC CCAGCTGTAA GTGGTTCTGG GTATAGTGAT
ACTCTGATTT ATTATGCTGT TGGCGGTGGA GGATTACCAA CTCCTGATAC CAGTTCTGAC
AAGCGTTATT TTAAAGCAAG TTTAAATGGA TGTAGTCAAA GCAAAACAGC ATTAGCAGAG
CTTGGACGTT TTACTGGCTA TATTCGAGAG TTTACAGCGA GTGGTACTAC AGGTATTTGG
AAAGAACTGC CTGAAACTAA CGGTACTGCA ATAAGTGTAG TTGATTGTTG GCAGGATATT
TCAAAAACAG ATCCTAACAA TTCATCATCA TACTCTAATG GATTTCCTGC CAATGGCCTA
ACAACTGGGT CTGGTAAAAA AAAGAAAGCC TATCCCTATT TTACTTCTTC ATCTCCAGGG
ACGAGTTGGG CTGATGCTTT AGCCGCTGCA AATAATACTG ATTTTGGCGT TGGTCAACCT
GTTACCTTGT ACACTGATAA TTATCTAAGA TGGTACGGAT TATCTAAAGC AGGGAAATTA
CCAACAGTAA AAGTTTCAAG ACTAGAAATT GCGAAGAAAG CGATTTCTAA TATTATTAGT
TCAACTCCAA CAGTGGATTT TGGACTTGCT GTATTTAACT ATAATTATCC AAATGAAGGT
AACCGAGACG GTGGGCGAAT TGTCTCTGGC ATTACTCAGA TGACGGATAG TACGCGTGCG
AGTTTACTAA CTACTATTGA TAATTTGTTG GCAAAAACAA ATACACCACT ATGTGAGACT
ATGTATGAAG CTTACCGTTA CTTTGCGGGA AAGGGAGTTA AATATGGTCA TGGTGATACT
GATTATGGCT CGTATGTAGG AAATAAACCC CCTTATGATA GTTTAGTGGA GAAGGGTGGT
AGCTACGAAA GTCCATTTAA AGTATGTACG GATATTGCTT ATGTTATTTA TGTCACTGAT
GGCACACCTA CTGTTGATAA AAATGCAAAT AATGATGTTA TTAGTTTAAC GGCTTCAGGA
AGTAAAGAAG GTAATTATTC CTCATTTTCT AAAAATTTAG ATACGGCAAG TTATTTACCC
GCCTTAGCTA GTTATATGTT TAATAATGAT TTAATCAATA AACTGGACAG CTCGAATACT
GAGCAGGTGC AAAATGTTCG TACTTATACT ATTGGCTTTA GTAAAGGTGC TGAAGATGCC
GCCCCTTTAC TTGCTGAAAC TGCAAAAAGA GGTGGCGGTT TATATTTTGC GGCTCAGAAC
AGTCTTGAAC TACAGAATGC ACTGAATGAT GCTTTATCGA ATATTTTGAA CATTGATTCA
AGTTTTACCT CCCCCAGTAT CGCCAGCAAT AATTTTGATA GAACTCAAAC ATTTGACGCA
GCTTATTACG CGATGTTTTT ACCTGGCAAA GGTCCTCGTT GGAGTGGTAA TTTAAAGAAA
TTAAAAGTGA CTGCAGATGG AACACTGGTT GATAGCAAAG GTAATGCCGC TATCGCCGAT
AACGGGAATA TTAAAGACGG CGCCTGTACT ATATGGTCAA ACTGTGATGC GCAAAAGGAC
GGCAATAAAG TTGAGGTAGG AGGCGTTGCA GCGCAAATAA GGACACAATC GGTTAGAAAA
ATTGTAAGTG ATTTAGGGGC GGGATCAAGT TTAACGCCAT TAACGCTTGC TAATGCACAA
AGTGCAGCAG GTGGTGATAC AGCGTTAGCT AGTTACATGA GAACTAGTGT AGATGAGCTT
ACAAATACAT TCGATTGGCT CAAAGGGATA GATGTCGATG ACGATAACAA AGATGGTAGT
ACGACTGATA AACGTAATGA CGTTATGGGT GACCCACTTC ACTCTAAGCC GCTAGCTCTT
AATTTTGGTT CATCTACAGC AACTGATATT CGTATTATGC TAGGCACTAA TCAAGGTGTT
TTGCATATGT TTAAAGATGC GGGAGAGTCT GTATCAGAAA CTTGGGGGTT TATTCCCTAT
GAATTATTGC CTAATTTAAC AGAACTAAGG AGTAATGATC CTTCAGGTGT GCATACAGTA
TATGGAATGG ACTCATCACC AGTCGCTTAC ACTGAGACGG ATGCTACAGG CAAAGTAATT
AAAGCATGGG TTTATGTAGG CATGCGTCGA GGAGGTTCGT CTTATTATGC CCTTAATGTG
ACAAATCCTG ACAGTCCTAC TTTAATGTGG TCGATTAATC CTTCAACCGA AGGTTTTTCA
GATCTCGGAC AAACATGGTC TGAACCAATA GTGACAAAAA TCGTCGGTTA TGAAAAGCCT
GTACTCATTT TTGGTGGTGG CTATGATACA AGCTTTGATG CCACTCCTCC TTCTTCTTCG
CCGGCTGGTC GTGCAGTGTA TATTGTCGAT GCAGAGAAGG GGACTTTGAT TCATTCTTTT
GGCGGTTCGG CCTCGGGTGC AACAGTACTT TCTGGCATTC AGGATAGCAT TCCAAACTCA
GTCGCGGTAC TTGATAGTAA TAATGATGGT TACACAGATC GCATTTATGC AACTGATGTT
GGTGGTAATG TTTGGCGTAT GGATTTGCCC AGTGCTAGCC AGAGTAGTTG GACCGCATTT
AAATTTGCAG CACTAGGAGG AAGCAATAAC GACAATAGAC GCTTTTATGC CGAGCCCGTG
GTTGCACAAA CGATGTTTAC TAACCTCGCT GAGGTCAAGG TTACTAGTGG TACTGGAACG
ACAACAACCA AAACCTACCA AAATGTTCCC TATGATGCCG TCGTGATAGG CAGTGGTGCC
AGACCTCATC CTTCTAGTAC TGCAGTGAAT GACATGTTTT TCACGTTGCA GGATAGGAAT
GTGGTGACTA AGAGTTTTAC TGGCAGTGAT ATTCCAAGCG TGATTACCAT CAATGATCTC
TATGATGTGT CTTCTAGCGC ACCAGTTTCG GAGACTGATA ATATTAGCTT TGGTAAAAAA
CTAGGCTGGT TTTATGATTT TTCTGGATTA GGAGAGAAGA GCTTAACTGC CGCCTTAATT
GTGCAAGGGA AGGTATATTT CACCTCTTAC TCACCACCTG CAGATTCTGT TGCCGAAAAC
GTCTGTGTAG TTTCTGGGTC TGGAAAGCTC TATGTATTTG ATCTTCATAA GGGAACAAGA
ACCTTCTCCC AGTTGTATTT TGAACTTGGT GAGCGAGTAC CCGATACGCC TCAGATTGTT
ATCCCTGCAC CTGAAACGGG GAAGGATCCT TACATTTATA TTATTGGAGT GGGTAAGGGT
GAGAAAAACA AAGATGGTGA ATATAGTGGA ACCATAAATG TAGCCTCTGG TTTAGGTGTG
AATAAAATTT ATTATCATAT AAATGAATGA
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| Protein sequence | MIIKRLACST LLVLTFVSAY SFGDDTELYV KESTTRTGAR PKVLVIFDNS GSMSTEEITQ
VVDYDPNYDY PAVSGSGYSD TLIYYAVGGG GLPTPDTSSD KRYFKASLNG CSQSKTALAE
LGRFTGYIRE FTASGTTGIW KELPETNGTA ISVVDCWQDI SKTDPNNSSS YSNGFPANGL
TTGSGKKKKA YPYFTSSSPG TSWADALAAA NNTDFGVGQP VTLYTDNYLR WYGLSKAGKL
PTVKVSRLEI AKKAISNIIS STPTVDFGLA VFNYNYPNEG NRDGGRIVSG ITQMTDSTRA
SLLTTIDNLL AKTNTPLCET MYEAYRYFAG KGVKYGHGDT DYGSYVGNKP PYDSLVEKGG
SYESPFKVCT DIAYVIYVTD GTPTVDKNAN NDVISLTASG SKEGNYSSFS KNLDTASYLP
ALASYMFNND LINKLDSSNT EQVQNVRTYT IGFSKGAEDA APLLAETAKR GGGLYFAAQN
SLELQNALND ALSNILNIDS SFTSPSIASN NFDRTQTFDA AYYAMFLPGK GPRWSGNLKK
LKVTADGTLV DSKGNAAIAD NGNIKDGACT IWSNCDAQKD GNKVEVGGVA AQIRTQSVRK
IVSDLGAGSS LTPLTLANAQ SAAGGDTALA SYMRTSVDEL TNTFDWLKGI DVDDDNKDGS
TTDKRNDVMG DPLHSKPLAL NFGSSTATDI RIMLGTNQGV LHMFKDAGES VSETWGFIPY
ELLPNLTELR SNDPSGVHTV YGMDSSPVAY TETDATGKVI KAWVYVGMRR GGSSYYALNV
TNPDSPTLMW SINPSTEGFS DLGQTWSEPI VTKIVGYEKP VLIFGGGYDT SFDATPPSSS
PAGRAVYIVD AEKGTLIHSF GGSASGATVL SGIQDSIPNS VAVLDSNNDG YTDRIYATDV
GGNVWRMDLP SASQSSWTAF KFAALGGSNN DNRRFYAEPV VAQTMFTNLA EVKVTSGTGT
TTTKTYQNVP YDAVVIGSGA RPHPSSTAVN DMFFTLQDRN VVTKSFTGSD IPSVITINDL
YDVSSSAPVS ETDNISFGKK LGWFYDFSGL GEKSLTAALI VQGKVYFTSY SPPADSVAEN
VCVVSGSGKL YVFDLHKGTR TFSQLYFELG ERVPDTPQIV IPAPETGKDP YIYIIGVGKG
EKNKDGEYSG TINVASGLGV NKIYYHINE
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